Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681246
Identifier: 182681246
GI number: 182681246
Start: 816268
End: 817203
Strand: Reverse
Name: 182681246
Synonym: XfasM23_0691
Alternate gene names: NA
Gene position: 817203-816268 (Counterclockwise)
Preceding gene: 182681250
Following gene: 182681243
Centisome position: 32.23
GC content: 47.01
Gene sequence:
>936_bases ATGAGTCAGTTTCAGAAAAACCGCTTTTATTTTAGTAATACAGTCGTTTTTACCTTGCTTGTGTTGTTATCTCTGGGAGC AAAAGCGGAACGAAGCGATAACGATGTGGTGGTGCAATCTATTTCCCAAGAGGAGCAAAACGCTGCACTTAAATATTGGA CGCCTGAACGCATGGCGGCGACACAGGCGATGCAGGCACAGGCTATAAAAATGATCAACGATGATCCAGGAAATGTTTCC GAATCTAAACGCGTCAGTACGCCAGCAGCTACTGAGATATTGACGGCAGGACTACTGTTTTTTCGAGTAAATGGTGAAGA TTCGTCCTGTACTGCCAATGTTGTACAGGCAGCCACAAAAAGTGTTATTGCTACTGCAGGTCATTGTGTCCAATCACCTG CAAATGAACATCATGAACGTATTGACCATCTTGTTTTCTTGCTTAATTACAATCACGGGCGCTGGAATGGGCGATTCCCT GTGAGAAACATATACACCGTGAACGGATGGTCACAGCAAGGCATAGATGGTTTTGACTTTGCTTTTCTAAGCGTGGCACA CAATAACTACGGTTCCAGACCAGGTGACCTTGTCATACAAACCCCGATCAGGTTTGCTGCTCCAGCTACACAGGGAACCT TCTCACTCTATGGCTATCCAAATGCCATTGATGAAGGTGAGCATCTGGTGAAATGCTCAGAACGAGCAGTATTTTATCCT GATCCCCATGGGGGCGGCCCGAGGGTGCGTTCGTTGCCCTATTGCCGTAATTTCAGCGAAGGGGCTTCTGGTGGCCCTGC ATTACAGAATCTGGCCGATGGTACATATCAAACAGGCAATGTTGAAGGTTATGTTGATAGAGTTGGAGCAGCAACTTTCA CCTATTGGGAAGCGGCTGCTCACGGTGCTTGGGATCGGGCACAACACGATCAATAG
Upstream 100 bases:
>100_bases GTGTGATTCGAAACGAAAAAATCCTAGTTCAATAATGAGAATAATTGCTTGGCTGGCGATTTATCAGCCTCTGTTATTTC CATTGATCTTTGGAGGGTTT
Downstream 100 bases:
>100_bases TTTTGTAGCGATGAATCAGTAGCAAGAATGTGACTCATTTGGGCCGTCCCTCCAAACAGGAGGGGCGATTCATGGTGTTT GTCGCTAATGGGATTGTTAG
Product: putative extracellular serine protease
Products: NA
Alternate protein names: V8-Like Glu-Specific Endopeptidase; Signal Peptide
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSQFQKNRFYFSNTVVFTLLVLLSLGAKAERSDNDVVVQSISQEEQNAALKYWTPERMAATQAMQAQAIKMINDDPGNVS ESKRVSTPAATEILTAGLLFFRVNGEDSSCTANVVQAATKSVIATAGHCVQSPANEHHERIDHLVFLLNYNHGRWNGRFP VRNIYTVNGWSQQGIDGFDFAFLSVAHNNYGSRPGDLVIQTPIRFAAPATQGTFSLYGYPNAIDEGEHLVKCSERAVFYP DPHGGGPRVRSLPYCRNFSEGASGGPALQNLADGTYQTGNVEGYVDRVGAATFTYWEAAAHGAWDRAQHDQ
Sequences:
>Translated_311_residues MSQFQKNRFYFSNTVVFTLLVLLSLGAKAERSDNDVVVQSISQEEQNAALKYWTPERMAATQAMQAQAIKMINDDPGNVS ESKRVSTPAATEILTAGLLFFRVNGEDSSCTANVVQAATKSVIATAGHCVQSPANEHHERIDHLVFLLNYNHGRWNGRFP VRNIYTVNGWSQQGIDGFDFAFLSVAHNNYGSRPGDLVIQTPIRFAAPATQGTFSLYGYPNAIDEGEHLVKCSERAVFYP DPHGGGPRVRSLPYCRNFSEGASGGPALQNLADGTYQTGNVEGYVDRVGAATFTYWEAAAHGAWDRAQHDQ >Mature_310_residues SQFQKNRFYFSNTVVFTLLVLLSLGAKAERSDNDVVVQSISQEEQNAALKYWTPERMAATQAMQAQAIKMINDDPGNVSE SKRVSTPAATEILTAGLLFFRVNGEDSSCTANVVQAATKSVIATAGHCVQSPANEHHERIDHLVFLLNYNHGRWNGRFPV RNIYTVNGWSQQGIDGFDFAFLSVAHNNYGSRPGDLVIQTPIRFAAPATQGTFSLYGYPNAIDEGEHLVKCSERAVFYPD PHGGGPRVRSLPYCRNFSEGASGGPALQNLADGTYQTGNVEGYVDRVGAATFTYWEAAAHGAWDRAQHDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34128; Mature: 33997
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFQKNRFYFSNTVVFTLLVLLSLGAKAERSDNDVVVQSISQEEQNAALKYWTPERMAA CCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHHHH TQAMQAQAIKMINDDPGNVSESKRVSTPAATEILTAGLLFFRVNGEDSSCTANVVQAATK HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHH SVIATAGHCVQSPANEHHERIDHLVFLLNYNHGRWNGRFPVRNIYTVNGWSQQGIDGFDF HHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHH AFLSVAHNNYGSRPGDLVIQTPIRFAAPATQGTFSLYGYPNAIDEGEHLVKCSERAVFYP HEEEEECCCCCCCCCCEEEECCCHHCCCCCCCCEEEECCCCCCCCCHHHHHHCCCEEECC DPHGGGPRVRSLPYCRNFSEGASGGPALQNLADGTYQTGNVEGYVDRVGAATFTYWEAAA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHH HGAWDRAQHDQ CCCCCCCCCCC >Mature Secondary Structure SQFQKNRFYFSNTVVFTLLVLLSLGAKAERSDNDVVVQSISQEEQNAALKYWTPERMAA CCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHHHH TQAMQAQAIKMINDDPGNVSESKRVSTPAATEILTAGLLFFRVNGEDSSCTANVVQAATK HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHH SVIATAGHCVQSPANEHHERIDHLVFLLNYNHGRWNGRFPVRNIYTVNGWSQQGIDGFDF HHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHH AFLSVAHNNYGSRPGDLVIQTPIRFAAPATQGTFSLYGYPNAIDEGEHLVKCSERAVFYP HEEEEECCCCCCCCCCEEEECCCHHCCCCCCCCEEEECCCCCCCCCHHHHHHCCCEEECC DPHGGGPRVRSLPYCRNFSEGASGGPALQNLADGTYQTGNVEGYVDRVGAATFTYWEAAA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHH HGAWDRAQHDQ CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA