| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is mreC [H]
Identifier: 182681146
GI number: 182681146
Start: 695462
End: 696412
Strand: Direct
Name: mreC [H]
Synonym: XfasM23_0588
Alternate gene names: 182681146
Gene position: 695462-696412 (Clockwise)
Preceding gene: 182681145
Following gene: 182681147
Centisome position: 27.43
GC content: 53.84
Gene sequence:
>951_bases GTGCCCTCCTATCCCGGTTTTTCATTAGCGTCTCGTTCGCCAGCAGTTGTCAGCACAATACGTTTGCTGACTTACTTAAC CTTGGCAATTGTGTTGGTTGTGCTCGACAGTCGCGGCGCTTGGTTGTCGCAGTTGCGGCAGCGGGCTAACTGGCTGGCGC AGCCGGTGTGGGCGCTGGCTGGGTTGCCTGGTTGGTTTGGTGGTCAGCTCAGTGAGCGTGCAATCAGTAATGCGCGTTTG GTTAACGAGAACCGTCAGTTGCGCAATCAGCTGTTGATTGCGAATGCCCGTTTGACCCGATTGCAAACGGCAGCACGTGA CAATGCCCAGTTGCGTGAGTTGCTTAATTTTGCTGAGCATCACGGTCTGGATGTGCAGTTGGCTCCGATTCTGGATGTTG ATTTGGATCCAACTCGGCAGCGTCTTGTCCTGGATGCCGGCAGCCGCGATGGTGTCAGCGTCGGTCAAACGGTGATTGAT GCTGGCGGTTTAATGGGTCAGGTGATTGAGGTGACGCCGCTGCATTCAATTGTTCTGCTGTTGACCGATCCGGATCACGC TGTGCCGGTGACTGTGGCACGTAATGGTGTTCGCTTGATTGTTTATGGGCGGGGGGATCGCTTAGAGCTGCGCAATATTC CGCTGAGTTCAGGTGTGAAAATTGGTGATGTTCTTATTACTTCAGGGCTGGGAGGGCGTTTCCCGGCTGGTTTCCCGGTG GGCAATATTTCAGCACTGCACCCGGATGATAGCCATGCTTTTCTAGTTGGGGAGATCACGCCGACAGCCAAGTTGGATCG TGGTCGTAATGTACTGTTGTTGCGCTTGGGTGGGTCCATGTCACCTGGTGGTGGAGGGTCGTTAACATCAAGATCTATTA TTGACTCAAACAGTGAGTCTCACTCCACCAATCTTGGCGCTTCCAGGGTAATCAAGGAGCCGCAGCAATGA
Upstream 100 bases:
>100_bases GCCTGAGCGTGCTGTACAGGGCAGGATAGGTGCCATAGTGGCGGCTCTTTCTGGTTGGCGGCGTCGTGAGTCTTAGGTTT TTCGATCATGTGGTTTTTCT
Downstream 100 bases:
>100_bases CCCGGCTGCGTAATACTTGGTTATTGCCGGTCAGCGTGATATTGGCCTTGCTTCTGGGGTTACTTCCGTTACCAGTGTCA GTGCGGCCAATCCGTCCTTA
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MPSYPGFSLASRSPAVVSTIRLLTYLTLAIVLVVLDSRGAWLSQLRQRANWLAQPVWALAGLPGWFGGQLSERAISNARL VNENRQLRNQLLIANARLTRLQTAARDNAQLRELLNFAEHHGLDVQLAPILDVDLDPTRQRLVLDAGSRDGVSVGQTVID AGGLMGQVIEVTPLHSIVLLLTDPDHAVPVTVARNGVRLIVYGRGDRLELRNIPLSSGVKIGDVLITSGLGGRFPAGFPV GNISALHPDDSHAFLVGEITPTAKLDRGRNVLLLRLGGSMSPGGGGSLTSRSIIDSNSESHSTNLGASRVIKEPQQ
Sequences:
>Translated_316_residues MPSYPGFSLASRSPAVVSTIRLLTYLTLAIVLVVLDSRGAWLSQLRQRANWLAQPVWALAGLPGWFGGQLSERAISNARL VNENRQLRNQLLIANARLTRLQTAARDNAQLRELLNFAEHHGLDVQLAPILDVDLDPTRQRLVLDAGSRDGVSVGQTVID AGGLMGQVIEVTPLHSIVLLLTDPDHAVPVTVARNGVRLIVYGRGDRLELRNIPLSSGVKIGDVLITSGLGGRFPAGFPV GNISALHPDDSHAFLVGEITPTAKLDRGRNVLLLRLGGSMSPGGGGSLTSRSIIDSNSESHSTNLGASRVIKEPQQ >Mature_315_residues PSYPGFSLASRSPAVVSTIRLLTYLTLAIVLVVLDSRGAWLSQLRQRANWLAQPVWALAGLPGWFGGQLSERAISNARLV NENRQLRNQLLIANARLTRLQTAARDNAQLRELLNFAEHHGLDVQLAPILDVDLDPTRQRLVLDAGSRDGVSVGQTVIDA GGLMGQVIEVTPLHSIVLLLTDPDHAVPVTVARNGVRLIVYGRGDRLELRNIPLSSGVKIGDVLITSGLGGRFPAGFPVG NISALHPDDSHAFLVGEITPTAKLDRGRNVLLLRLGGSMSPGGGGSLTSRSIIDSNSESHSTNLGASRVIKEPQQ
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=255, Percent_Identity=37.2549019607843, Blast_Score=146, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 33825; Mature: 33694
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSYPGFSLASRSPAVVSTIRLLTYLTLAIVLVVLDSRGAWLSQLRQRANWLAQPVWALA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH GLPGWFGGQLSERAISNARLVNENRQLRNQLLIANARLTRLQTAARDNAQLRELLNFAEH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHCCHHHHHHHHHHCCCHHHHHHHHHHHH HGLDVQLAPILDVDLDPTRQRLVLDAGSRDGVSVGQTVIDAGGLMGQVIEVTPLHSIVLL CCCCEEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHEEEEECCCEEEEE LTDPDHAVPVTVARNGVRLIVYGRGDRLELRNIPLSSGVKIGDVLITSGLGGRFPAGFPV EECCCCCEEEEEECCCEEEEEEECCCEEEEECCCCCCCCEECCEEEECCCCCCCCCCCCC GNISALHPDDSHAFLVGEITPTAKLDRGRNVLLLRLGGSMSPGGGGSLTSRSIIDSNSES CCEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCC HSTNLGASRVIKEPQQ CCCCCCHHHHHCCCCC >Mature Secondary Structure PSYPGFSLASRSPAVVSTIRLLTYLTLAIVLVVLDSRGAWLSQLRQRANWLAQPVWALA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH GLPGWFGGQLSERAISNARLVNENRQLRNQLLIANARLTRLQTAARDNAQLRELLNFAEH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHCCHHHHHHHHHHCCCHHHHHHHHHHHH HGLDVQLAPILDVDLDPTRQRLVLDAGSRDGVSVGQTVIDAGGLMGQVIEVTPLHSIVLL CCCCEEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHEEEEECCCEEEEE LTDPDHAVPVTVARNGVRLIVYGRGDRLELRNIPLSSGVKIGDVLITSGLGGRFPAGFPV EECCCCCEEEEEECCCEEEEEEECCCEEEEECCCCCCCCEECCEEEECCCCCCCCCCCCC GNISALHPDDSHAFLVGEITPTAKLDRGRNVLLLRLGGSMSPGGGGSLTSRSIIDSNSES CCEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCC HSTNLGASRVIKEPQQ CCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]