Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681135
Identifier: 182681135
GI number: 182681135
Start: 686222
End: 687148
Strand: Reverse
Name: 182681135
Synonym: XfasM23_0577
Alternate gene names: NA
Gene position: 687148-686222 (Counterclockwise)
Preceding gene: 182681136
Following gene: 182681134
Centisome position: 27.1
GC content: 52.64
Gene sequence:
>927_bases ATGGAAACCAAAGCTAACTACGTCCTGATCGGTTCCTTCACCATTCTGACTGGGCTGGCACTGCTGATTTTTGGCCTATG GGCAGCCAAGTACTCTTCCGACCGCACCTGGCAAAACTATCGCGTAGTGTTCCGTGAGGCAGTCACTGGCCTATCCGTCG GCAGTCCGGTGCAGTACAACGGAATCGCAATCGGTTCAATCACCCAACTCACTCTCGCCCCGAACGACCCGCGCCAAGTC GTCGCACATATACGTGTCAACTCAACCACACCTGTCAAGAAAGACACGCGCGCCAAACTGGCAATCACCAGCCTGACCGG CCCATCCATCATCCAATTATCTGGCGGCACCCCGGAATCACCATCGCTGACAAGCATTTATAAAGATGACGCACCCATTA TCCAAACCACCCCGTCTGCATTACAGAACATCACCGACACTGCTAACGACATCGTCGAACGTTTGTACGATGTCCTCAGC GACAAGAATGTCGCAGCGATCTCAACCATCCTGCAGAACATGCAGAAAATCAGCGGCCAAGTATCCGACAGTGATACAGG CTTGGAAGCACTACTGACCAGCGCGCGCGATGCCACACGCCAACTCAACACCACCCTGACCACCGCCAACGGCACAGTGC AGCAATTGGACAATAACCTGGTGAAACAACTGCCGATCATCCTCAACAAACTCGAAGCCACATTGACCAAGATCGACGCA ACTGCCAGCAACGCAAATAGCATCCTTGACAACAATCAAGCAGCCATCAACAGCTTTGCCAACGAAGGCCTGAGCCAATT TGCTCCGACTATGAGCGAGCTAAGCAACCTGATCCGTGACTTGCGTCAAATCAGCAACAAACTCGAAGGCAATCCAAAAC GTTACCTACTTGGCCGCGATGCTCCTAAGGAATTCGACCCCAAATGA
Upstream 100 bases:
>100_bases TGAAAACATCGACCACCCGTGGATCCGTGAGTATTTTCACGGACCACGGGGGCGTGCTGCGCGTACAGCACAGCACACCT CTACAGGAAGCAGCTGAACC
Downstream 100 bases:
>100_bases AGCTGATCCATCCCCTGGTGTGCCTATCCGTACTCACGCTCGCCAGCTGCTCCTCAACACTACTAGGCGAAAAAAAACCG ACCACGATTTATTCACCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues METKANYVLIGSFTILTGLALLIFGLWAAKYSSDRTWQNYRVVFREAVTGLSVGSPVQYNGIAIGSITQLTLAPNDPRQV VAHIRVNSTTPVKKDTRAKLAITSLTGPSIIQLSGGTPESPSLTSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLS DKNVAAISTILQNMQKISGQVSDSDTGLEALLTSARDATRQLNTTLTTANGTVQQLDNNLVKQLPIILNKLEATLTKIDA TASNANSILDNNQAAINSFANEGLSQFAPTMSELSNLIRDLRQISNKLEGNPKRYLLGRDAPKEFDPK
Sequences:
>Translated_308_residues METKANYVLIGSFTILTGLALLIFGLWAAKYSSDRTWQNYRVVFREAVTGLSVGSPVQYNGIAIGSITQLTLAPNDPRQV VAHIRVNSTTPVKKDTRAKLAITSLTGPSIIQLSGGTPESPSLTSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLS DKNVAAISTILQNMQKISGQVSDSDTGLEALLTSARDATRQLNTTLTTANGTVQQLDNNLVKQLPIILNKLEATLTKIDA TASNANSILDNNQAAINSFANEGLSQFAPTMSELSNLIRDLRQISNKLEGNPKRYLLGRDAPKEFDPK >Mature_308_residues METKANYVLIGSFTILTGLALLIFGLWAAKYSSDRTWQNYRVVFREAVTGLSVGSPVQYNGIAIGSITQLTLAPNDPRQV VAHIRVNSTTPVKKDTRAKLAITSLTGPSIIQLSGGTPESPSLTSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLS DKNVAAISTILQNMQKISGQVSDSDTGLEALLTSARDATRQLNTTLTTANGTVQQLDNNLVKQLPIILNKLEATLTKIDA TASNANSILDNNQAAINSFANEGLSQFAPTMSELSNLIRDLRQISNKLEGNPKRYLLGRDAPKEFDPK
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005586 - InterPro: IPR003399 [H]
Pfam domain/function: PF03886 DUF330; PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 33302; Mature: 33302
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKANYVLIGSFTILTGLALLIFGLWAAKYSSDRTWQNYRVVFREAVTGLSVGSPVQYN CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEC GIAIGSITQLTLAPNDPRQVVAHIRVNSTTPVKKDTRAKLAITSLTGPSIIQLSGGTPES CEEECCEEEEEECCCCHHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCC PSLTSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLSDKNVAAISTILQNMQKISGQ CCCHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC VSDSDTGLEALLTSARDATRQLNTTLTTANGTVQQLDNNLVKQLPIILNKLEATLTKIDA CCCCCHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TASNANSILDNNQAAINSFANEGLSQFAPTMSELSNLIRDLRQISNKLEGNPKRYLLGRD CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC APKEFDPK CCCCCCCC >Mature Secondary Structure METKANYVLIGSFTILTGLALLIFGLWAAKYSSDRTWQNYRVVFREAVTGLSVGSPVQYN CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEC GIAIGSITQLTLAPNDPRQVVAHIRVNSTTPVKKDTRAKLAITSLTGPSIIQLSGGTPES CEEECCEEEEEECCCCHHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCC PSLTSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLSDKNVAAISTILQNMQKISGQ CCCHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC VSDSDTGLEALLTSARDATRQLNTTLTTANGTVQQLDNNLVKQLPIILNKLEATLTKIDA CCCCCHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TASNANSILDNNQAAINSFANEGLSQFAPTMSELSNLIRDLRQISNKLEGNPKRYLLGRD CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC APKEFDPK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275; 1551834 [H]