| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681037
Identifier: 182681037
GI number: 182681037
Start: 579371
End: 579853
Strand: Direct
Name: 182681037
Synonym: XfasM23_0476
Alternate gene names: NA
Gene position: 579371-579853 (Clockwise)
Preceding gene: 182681036
Following gene: 182681038
Centisome position: 22.85
GC content: 52.8
Gene sequence:
>483_bases ATGCGAATTCTGCTTGCTCTCGCCTCCCTAAGTGGTAACACACGTGAAGTGGCCCGTGTCATCAGGGCGCGCTGTGAGGA GAGAGGTCATCGCGTGGATTGGATCGAGACTGACTTGCAAACGCTTGCTGGGCAAGCCCTTGATCCACATACCTACACAT TATTCTTGCTTGGCACCTGGACTGATAACGCTGGTCGTACCCCGTTCGAGATGAAGCGTTTTATTGTTGAATTGTTAGAG CTGATTGGCAAGCCGCCGTCTGTCGCGGTCTTTGGTACAGGCGAGACACAATGGGGGCAGGAGTATTATTGCGGTGCGGT GCATCGGATCTCGGATTTTTTTGCCAGCCGATTCCCGCGTTTGTTGATCGAACAGATGCCGCATGGCGAGCGTGATGCGC TTGCCATTGTTGAATGGACTGATCAAGTCCTGGATCAATGCAACAAGGATTCCGATGCAGATCATTACCGCTACGTCGCC TGA
Upstream 100 bases:
>100_bases ATTTTACCGAGACAAAAACGGATTTCTTTGAGATGCGTAATGCCAGCTATAAGAAGACCAATGTAGACAACTGCTTTGAC GACTTATAGCTGATGATGCC
Downstream 100 bases:
>100_bases CGAATTCAATGCCGCCTTGAAGGCGCATTCCCGCCTGTTGGTGGACTTCTATAAGGAACATTGTCCTGGCTGCCGTATGC TAGATATGGCTTTGAACAAA
Product: flavodoxin
Products: NA
Alternate protein names: Flavodoxin Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MRILLALASLSGNTREVARVIRARCEERGHRVDWIETDLQTLAGQALDPHTYTLFLLGTWTDNAGRTPFEMKRFIVELLE LIGKPPSVAVFGTGETQWGQEYYCGAVHRISDFFASRFPRLLIEQMPHGERDALAIVEWTDQVLDQCNKDSDADHYRYVA
Sequences:
>Translated_160_residues MRILLALASLSGNTREVARVIRARCEERGHRVDWIETDLQTLAGQALDPHTYTLFLLGTWTDNAGRTPFEMKRFIVELLE LIGKPPSVAVFGTGETQWGQEYYCGAVHRISDFFASRFPRLLIEQMPHGERDALAIVEWTDQVLDQCNKDSDADHYRYVA >Mature_160_residues MRILLALASLSGNTREVARVIRARCEERGHRVDWIETDLQTLAGQALDPHTYTLFLLGTWTDNAGRTPFEMKRFIVELLE LIGKPPSVAVFGTGETQWGQEYYCGAVHRISDFFASRFPRLLIEQMPHGERDALAIVEWTDQVLDQCNKDSDADHYRYVA
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18284; Mature: 18284
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS50902 FLAVODOXIN_LIKE ; PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLALASLSGNTREVARVIRARCEERGHRVDWIETDLQTLAGQALDPHTYTLFLLGTW CHHEEEEHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEC TDNAGRTPFEMKRFIVELLELIGKPPSVAVFGTGETQWGQEYYCGAVHRISDFFASRFPR CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH LLIEQMPHGERDALAIVEWTDQVLDQCNKDSDADHYRYVA HHHHHCCCCCCHHEEHHHHHHHHHHHCCCCCCCCCEEECC >Mature Secondary Structure MRILLALASLSGNTREVARVIRARCEERGHRVDWIETDLQTLAGQALDPHTYTLFLLGTW CHHEEEEHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEC TDNAGRTPFEMKRFIVELLELIGKPPSVAVFGTGETQWGQEYYCGAVHRISDFFASRFPR CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH LLIEQMPHGERDALAIVEWTDQVLDQCNKDSDADHYRYVA HHHHHCCCCCCHHEEHHHHHHHHHHHCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA