Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681033
Identifier: 182681033
GI number: 182681033
Start: 573510
End: 574547
Strand: Direct
Name: 182681033
Synonym: XfasM23_0472
Alternate gene names: NA
Gene position: 573510-574547 (Clockwise)
Preceding gene: 182681032
Following gene: 182681034
Centisome position: 22.62
GC content: 50.67
Gene sequence:
>1038_bases ATGCTCCGCGATTTCCGAATTTCTTTCATCTTTACCGCCTTCTGTCTTAGTTTGGCTGCTTGGTGGGGGTACAGCACTGC TCTCGGTGTCTGGCAGGCACTGTGGCTATGCTTAGTGCTGAGTGTGCTGGAAGTTTCGCTGTCATTTGACAACGCGGTGA TTAATGCTGGCATTCTCAAGCACATGAGTGAATTCTGGCGAAAGCTGTTTCTCACGATTGGCATTTTCATTGCTGTATTT GGTATGCGTCTGGTGTTTCCTATTGTCATCGTTGCGGTCGCGACCGGCATGGGCTTGATTCCAGTGATGAAGTTGGCGTT GGAACACCCCGAGCAATACAGCCTAGTGCTGACGGATCACTACCCTTCGATTGCTGCGTTTGGCGGTATGTTCTTATTGC TGGTGTTCCTCAACTTTCTGTTTGATAACGAACGGCAGCTGCACTGGTTGGGTCCGATTGAACGCATGCTCGCCAAACTT GGTAAGGCTGATGCTATGGCGGTAATTGTCGCAGTTGCTTGTTTGATGGGGACCAAGTTTTTCTTGCCTTACGAAGTGTT TCAGGATGTCTTGTTTGCCGGCCTTGGCGGTATCCTGCTGTACTTGTTGGTGGATAGCGTCGATGCGCTATTCAAGATGG ACGGACAGGAGGATGGGGTGATGGGGCCGGGGAAGCGCTCCGGTGTCGCTGCGTTCCTGTACCTGGAAGTGCTTGATGCC TCGTTCTCATTCGATGGGGTGATCGGCGCGTTCGCTATTACCCGCGATGTCGTCATCATTATGCTTGGTCTTGCAATCGG CGCTATGTTTGTGCGTTCAATCACTTTGTACTTGGTTCGCAAAGGGACGTTGGATGAATTTGTTTTTCTCGAACATGGTG CGCATTACGCGATTGGTGTGCTTGCGGTCATCATGCTGGTTGGTACCGTATATCATGTCCCTGAGGTAATTACTGGGCTG ATGGGCGTGGCTTTAATCGCTGCTTCGCTCTGGTCGTCGTTTCAATACCGTAAGCGCTTAATTACTGTTGGTCGTTGA
Upstream 100 bases:
>100_bases GTGTGGACGACTCCAGCTTTTTCTTTCCCTTTCTATGCGGTTGTAGCAGCGCATACATTAAGGGAGTTTAGTTTATGCTT CTTGTTGTTCTGGATTCTTT
Downstream 100 bases:
>100_bases GCGGCATCTATTTTTATTACTGGTTAGGCAACGCTTCCTTGTGTCCCATCAATCCATGCCACCTAAGAATGATTGCCCCT TTGGATTCACTTGTGATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLRDFRISFIFTAFCLSLAAWWGYSTALGVWQALWLCLVLSVLEVSLSFDNAVINAGILKHMSEFWRKLFLTIGIFIAVF GMRLVFPIVIVAVATGMGLIPVMKLALEHPEQYSLVLTDHYPSIAAFGGMFLLLVFLNFLFDNERQLHWLGPIERMLAKL GKADAMAVIVAVACLMGTKFFLPYEVFQDVLFAGLGGILLYLLVDSVDALFKMDGQEDGVMGPGKRSGVAAFLYLEVLDA SFSFDGVIGAFAITRDVVIIMLGLAIGAMFVRSITLYLVRKGTLDEFVFLEHGAHYAIGVLAVIMLVGTVYHVPEVITGL MGVALIAASLWSSFQYRKRLITVGR
Sequences:
>Translated_345_residues MLRDFRISFIFTAFCLSLAAWWGYSTALGVWQALWLCLVLSVLEVSLSFDNAVINAGILKHMSEFWRKLFLTIGIFIAVF GMRLVFPIVIVAVATGMGLIPVMKLALEHPEQYSLVLTDHYPSIAAFGGMFLLLVFLNFLFDNERQLHWLGPIERMLAKL GKADAMAVIVAVACLMGTKFFLPYEVFQDVLFAGLGGILLYLLVDSVDALFKMDGQEDGVMGPGKRSGVAAFLYLEVLDA SFSFDGVIGAFAITRDVVIIMLGLAIGAMFVRSITLYLVRKGTLDEFVFLEHGAHYAIGVLAVIMLVGTVYHVPEVITGL MGVALIAASLWSSFQYRKRLITVGR >Mature_345_residues MLRDFRISFIFTAFCLSLAAWWGYSTALGVWQALWLCLVLSVLEVSLSFDNAVINAGILKHMSEFWRKLFLTIGIFIAVF GMRLVFPIVIVAVATGMGLIPVMKLALEHPEQYSLVLTDHYPSIAAFGGMFLLLVFLNFLFDNERQLHWLGPIERMLAKL GKADAMAVIVAVACLMGTKFFLPYEVFQDVLFAGLGGILLYLLVDSVDALFKMDGQEDGVMGPGKRSGVAAFLYLEVLDA SFSFDGVIGAFAITRDVVIIMLGLAIGAMFVRSITLYLVRKGTLDEFVFLEHGAHYAIGVLAVIMLVGTVYHVPEVITGL MGVALIAASLWSSFQYRKRLITVGR
Specific function: Unknown
COG id: COG2899
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38047; Mature: 38047
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRDFRISFIFTAFCLSLAAWWGYSTALGVWQALWLCLVLSVLEVSLSFDNAVINAGILK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMSEFWRKLFLTIGIFIAVFGMRLVFPIVIVAVATGMGLIPVMKLALEHPEQYSLVLTDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECC YPSIAAFGGMFLLLVFLNFLFDNERQLHWLGPIERMLAKLGKADAMAVIVAVACLMGTKF CCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCHH FLPYEVFQDVLFAGLGGILLYLLVDSVDALFKMDGQEDGVMGPGKRSGVAAFLYLEVLDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC SFSFDGVIGAFAITRDVVIIMLGLAIGAMFVRSITLYLVRKGTLDEFVFLEHGAHYAIGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH LAVIMLVGTVYHVPEVITGLMGVALIAASLWSSFQYRKRLITVGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLRDFRISFIFTAFCLSLAAWWGYSTALGVWQALWLCLVLSVLEVSLSFDNAVINAGILK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMSEFWRKLFLTIGIFIAVFGMRLVFPIVIVAVATGMGLIPVMKLALEHPEQYSLVLTDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECC YPSIAAFGGMFLLLVFLNFLFDNERQLHWLGPIERMLAKLGKADAMAVIVAVACLMGTKF CCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCHH FLPYEVFQDVLFAGLGGILLYLLVDSVDALFKMDGQEDGVMGPGKRSGVAAFLYLEVLDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC SFSFDGVIGAFAITRDVVIIMLGLAIGAMFVRSITLYLVRKGTLDEFVFLEHGAHYAIGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH LAVIMLVGTVYHVPEVITGLMGVALIAASLWSSFQYRKRLITVGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA