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The map label for this gene is atpH

Identifier: 182680988

GI number: 182680988

Start: 532514

End: 533041

Strand: Reverse

Name: atpH

Synonym: XfasM23_0427

Alternate gene names: 182680988

Gene position: 533041-532514 (Counterclockwise)

Preceding gene: 182680989

Following gene: 182680987

Centisome position: 21.02

GC content: 49.62

Gene sequence:

>528_bases
ATGATTCAGGCCCTTACGCTGGCTCGTCCTTACGCTCGTGCAGCGTTCGCCATAGCCTGTGAAAAAGGTAAGTGTATGCA
GTGGTCACAAGCGTTAACATTCTCCGCGCAAGTCGCAAACAATCCCATTGTGGCTACGTTGCTTTCCCATCCACAACTAG
ATCATGAACAAGCCGCAGCACTACTGTCACCTGAAGGAGCGGATCCGGCTTATATACGCTTTCTAGAGGTAATCGCCGAA
GCACATCGACTTGATGTATTACTACAGGTTGCAGGCTTGTATGAAAAATTACGCGCCGAAGCCCAGCATGTCATCAAAGC
TAAGATCACATCTGCCATTGAGCTTGCGCCAAATGAACTAAACAACATTGTCACCGCACTGAAAAAACGCTTTGACTGCG
AGATTGAGGTCACCACTGGTGTTGACCACTCACTGATCGGTGGTGCAGTGATCGACACTGGTAACGTAGTCATCGACGGC
TCTATCAAAAGCAAGCTCACACGCTTACAGGCCTCGCTGACCCACTGA

Upstream 100 bases:

>100_bases
TATACTCGCTGTTAACGGTGCTGAAAAGCTACTTAAACGTGAAATCGACGTTAACACACACAAAATGCTACTTGATGAGC
TCGCTGCGGAGATTTGACCC

Downstream 100 bases:

>100_bases
AACTCACAAACTGTCAGCTCCCCCAGGCCGACGCAATTAGGACTCAACGATGGCAACCACCCTCAACCCTTCCGAAATAA
GCGAATTGATTAAGACTCGC

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MIQALTLARPYARAAFAIACEKGKCMQWSQALTFSAQVANNPIVATLLSHPQLDHEQAAALLSPEGADPAYIRFLEVIAE
AHRLDVLLQVAGLYEKLRAEAQHVIKAKITSAIELAPNELNNIVTALKKRFDCEIEVTTGVDHSLIGGAVIDTGNVVIDG
SIKSKLTRLQASLTH

Sequences:

>Translated_175_residues
MIQALTLARPYARAAFAIACEKGKCMQWSQALTFSAQVANNPIVATLLSHPQLDHEQAAALLSPEGADPAYIRFLEVIAE
AHRLDVLLQVAGLYEKLRAEAQHVIKAKITSAIELAPNELNNIVTALKKRFDCEIEVTTGVDHSLIGGAVIDTGNVVIDG
SIKSKLTRLQASLTH
>Mature_175_residues
MIQALTLARPYARAAFAIACEKGKCMQWSQALTFSAQVANNPIVATLLSHPQLDHEQAAALLSPEGADPAYIRFLEVIAE
AHRLDVLLQVAGLYEKLRAEAQHVIKAKITSAIELAPNELNNIVTALKKRFDCEIEVTTGVDHSLIGGAVIDTGNVVIDG
SIKSKLTRLQASLTH

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=171, Percent_Identity=32.7485380116959, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_XYLF2 (B2I863)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001829148.1
- ProteinModelPortal:   B2I863
- GeneID:   6203003
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_0427
- HOGENOM:   HBG668108
- OMA:   ASLERKF
- ProtClustDB:   PRK05758
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 18891; Mature: 18891

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQALTLARPYARAAFAIACEKGKCMQWSQALTFSAQVANNPIVATLLSHPQLDHEQAAA
CCCCHHHCCHHHHHHHEEEECCCCCCCHHHHHEEEHHHCCCCEEEEECCCCCCCHHHHHH
LLSPEGADPAYIRFLEVIAEAHRLDVLLQVAGLYEKLRAEAQHVIKAKITSAIELAPNEL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
NNIVTALKKRFDCEIEVTTGVDHSLIGGAVIDTGNVVIDGSIKSKLTRLQASLTH
HHHHHHHHHHCCCEEEEECCCCCHHHCCEEEECCCEEEECHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQALTLARPYARAAFAIACEKGKCMQWSQALTFSAQVANNPIVATLLSHPQLDHEQAAA
CCCCHHHCCHHHHHHHEEEECCCCCCCHHHHHEEEHHHCCCCEEEEECCCCCCCHHHHHH
LLSPEGADPAYIRFLEVIAEAHRLDVLLQVAGLYEKLRAEAQHVIKAKITSAIELAPNEL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
NNIVTALKKRFDCEIEVTTGVDHSLIGGAVIDTGNVVIDGSIKSKLTRLQASLTH
HHHHHHHHHHCCCEEEEECCCCCHHHCCEEEECCCEEEECHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA