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The map label for this gene is atpF

Identifier: 182680989

GI number: 182680989

Start: 533045

End: 533515

Strand: Reverse

Name: atpF

Synonym: XfasM23_0428

Alternate gene names: 182680989

Gene position: 533515-533045 (Counterclockwise)

Preceding gene: 182680990

Following gene: 182680988

Centisome position: 21.04

GC content: 43.74

Gene sequence:

>471_bases
ATGGACATCACATTTACTATCTTTGCCCAATCCCTAGCCTTCGCAGCTTTGATTTGGATCGTGGCAACCAAGATTTGGCC
GCCATTGATAAAGGTAATTGAGGAGCGGCAGCAAAAAATTGCAGAGGGTTTAGCTGCTGCTGACCTCGGCCAAAAGGAAT
TAGCTCAAGCCCAAGAAGAAATTAAAAAGACATTAAAAAATGCACACAAAAAGGCCAACGAAATCATCGAACAAGCTCAT
GCACGTGCTCATCAAATTATCGAAGCAGCAAAAGCTGAAGCAATCGCTGAAACCAATCGGCAGCAAAATTTGGCACAGGT
TGAAATAGAAGCAGCTGCAAAACGCGCCAGAGAGGAGTTACGTAAGCATGTATCTATACTCGCTGTTAACGGTGCTGAAA
AGCTACTTAAACGTGAAATCGACGTTAACACACACAAAATGCTACTTGATGAGCTCGCTGCGGAGATTTGA

Upstream 100 bases:

>100_bases
GCTAAACACACACATGAAGCACTTGGCCACACTATGCAATGTGGAGTCACACTCGCTTTTGTAGTGTCACCATAATCCGT
AATAAGCAATTGAGAGCCCT

Downstream 100 bases:

>100_bases
CCCATGATTCAGGCCCTTACGCTGGCTCGTCCTTACGCTCGTGCAGCGTTCGCCATAGCCTGTGAAAAAGGTAAGTGTAT
GCAGTGGTCACAAGCGTTAA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDITFTIFAQSLAFAALIWIVATKIWPPLIKVIEERQQKIAEGLAAADLGQKELAQAQEEIKKTLKNAHKKANEIIEQAH
ARAHQIIEAAKAEAIAETNRQQNLAQVEIEAAAKRAREELRKHVSILAVNGAEKLLKREIDVNTHKMLLDELAAEI

Sequences:

>Translated_156_residues
MDITFTIFAQSLAFAALIWIVATKIWPPLIKVIEERQQKIAEGLAAADLGQKELAQAQEEIKKTLKNAHKKANEIIEQAH
ARAHQIIEAAKAEAIAETNRQQNLAQVEIEAAAKRAREELRKHVSILAVNGAEKLLKREIDVNTHKMLLDELAAEI
>Mature_156_residues
MDITFTIFAQSLAFAALIWIVATKIWPPLIKVIEERQQKIAEGLAAADLGQKELAQAQEEIKKTLKNAHKKANEIIEQAH
ARAHQIIEAAKAEAIAETNRQQNLAQVEIEAAAKRAREELRKHVSILAVNGAEKLLKREIDVNTHKMLLDELAAEI

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=45.5128205128205, Blast_Score=123, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_XYLF2 (B2I864)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001829149.1
- ProteinModelPortal:   B2I864
- GeneID:   6203027
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_0428
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- ProtClustDB:   PRK05759
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17411; Mature: 17411

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13254050)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDITFTIFAQSLAFAALIWIVATKIWPPLIKVIEERQQKIAEGLAAADLGQKELAQAQEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IKKTLKNAHKKANEIIEQAHARAHQIIEAAKAEAIAETNRQQNLAQVEIEAAAKRAREEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKHVSILAVNGAEKLLKREIDVNTHKMLLDELAAEI
HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCH
>Mature Secondary Structure
MDITFTIFAQSLAFAALIWIVATKIWPPLIKVIEERQQKIAEGLAAADLGQKELAQAQEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IKKTLKNAHKKANEIIEQAHARAHQIIEAAKAEAIAETNRQQNLAQVEIEAAAKRAREEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKHVSILAVNGAEKLLKREIDVNTHKMLLDELAAEI
HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA