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The map label for this gene is atpC

Identifier: 182680984

GI number: 182680984

Start: 527978

End: 528409

Strand: Reverse

Name: atpC

Synonym: XfasM23_0423

Alternate gene names: 182680984

Gene position: 528409-527978 (Counterclockwise)

Preceding gene: 182680985

Following gene: 182680983

Centisome position: 20.84

GC content: 50.69

Gene sequence:

>432_bases
ATGGCATCCATGAGCACTATCCGTTGTGACATAGTCAGCGCTGAGCAAGAGATCTTTCATGGTGAAGCCACCTTTGTCGT
GGCCACAGGAGAACTTGGCGAACTGGGAATTGCCCCAAAACATGCGCCACTGATCACTCGTCTGAAACCTGGCAAAGTAG
TCATTACCACTGTAAACGGCGAACAACTCGACTTCGCCATTTCTGGTGGCATCCTAGAGGTACAACCGCAAGTCGTCACG
ATTTTGGCAGACTCAGCAATACGTGCAGACACAATTGACGAAGTGGCCGTACGTAAAGCAAAGGAAGAAGCCGAACGCAT
CCTGGCCAATCGTGGCGAAACGATTGACGTAGCTAAAGCACAACAGCAATTAGTTGAAGCTGTCGTGCAGATGCAAGCAT
TGGAACGCCTCCGCCGCACAGTCAAACACTGA

Upstream 100 bases:

>100_bases
CATCGAAAAAGCCAACAAAATGACAGCATGATTGACTTCCTCGGATAAGAATCAGCTCAATCCTCTACTGCATTGGAACA
GGATTCACCCTAGAAAACAC

Downstream 100 bases:

>100_bases
CATTTTCTCCGGCAGAAGATCGGAGCTCATCACCCATTCCACTATTAGCTAGAGAAATACCGATATCGGTAATCAAAAGA
GTGGGTCTAAAGCCAATTCT

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MASMSTIRCDIVSAEQEIFHGEATFVVATGELGELGIAPKHAPLITRLKPGKVVITTVNGEQLDFAISGGILEVQPQVVT
ILADSAIRADTIDEVAVRKAKEEAERILANRGETIDVAKAQQQLVEAVVQMQALERLRRTVKH

Sequences:

>Translated_143_residues
MASMSTIRCDIVSAEQEIFHGEATFVVATGELGELGIAPKHAPLITRLKPGKVVITTVNGEQLDFAISGGILEVQPQVVT
ILADSAIRADTIDEVAVRKAKEEAERILANRGETIDVAKAQQQLVEAVVQMQALERLRRTVKH
>Mature_142_residues
ASMSTIRCDIVSAEQEIFHGEATFVVATGELGELGIAPKHAPLITRLKPGKVVITTVNGEQLDFAISGGILEVQPQVVTI
LADSAIRADTIDEVAVRKAKEEAERILANRGETIDVAKAQQQLVEAVVQMQALERLRRTVKH

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

Organism=Escherichia coli, GI1790169, Length=136, Percent_Identity=41.9117647058824, Blast_Score=111, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N [H]

EC number: 3.6.3.14

Molecular weight: Translated: 15480; Mature: 15349

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASMSTIRCDIVSAEQEIFHGEATFVVATGELGELGIAPKHAPLITRLKPGKVVITTVNG
CCCCCEEEEEEECCHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEECC
EQLDFAISGGILEVQPQVVTILADSAIRADTIDEVAVRKAKEEAERILANRGETIDVAKA
CEEEEEEECCEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHH
QQQLVEAVVQMQALERLRRTVKH
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASMSTIRCDIVSAEQEIFHGEATFVVATGELGELGIAPKHAPLITRLKPGKVVITTVNG
CCCCEEEEEEECCHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEECC
EQLDFAISGGILEVQPQVVTILADSAIRADTIDEVAVRKAKEEAERILANRGETIDVAKA
CEEEEEEECCEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHH
QQQLVEAVVQMQALERLRRTVKH
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]