Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is glmU
Identifier: 182680982
GI number: 182680982
Start: 525417
End: 526790
Strand: Reverse
Name: glmU
Synonym: XfasM23_0421
Alternate gene names: 182680982
Gene position: 526790-525417 (Counterclockwise)
Preceding gene: 182680983
Following gene: 182680977
Centisome position: 20.78
GC content: 54.59
Gene sequence:
>1374_bases ATGCCTCTGTCCCTACCCCTACACATCGTGATCCTTGCCGCCGGCGAAGGTAAGCGCATGAAATCGGCACTGCCAAAAGT ACTGCATCCCATCGCCGGAAAACCGATGCTCGCGCATGTGATTACGACCGCACGCGCACTCACTCCAGACGCGATCCACG TAGTCTACGGCCACGCTGGCAACCAAGTCCGCGCAGCATTTGCAGACCAGACCGACCTACACTGGGTCGAACAGACTCAG CAACTTGGCACGGGACACGCAGTCAAACAAACGATGTCGGCCATCCCGAATGCAGCAAACGTACTCGTACTGTATGGCGA CGTACCATTGATTCGTGCCGAAACCCTGCAACGTCTGCCAAGAGCATCTACACCGATCGCCGTACTGGTTACAGAGCTCG CAAACCCAGCTGGCTACGGCCACATCGTACGCAATAGCGAAGGCAAAGTCGCAGCGATCATTGAAGACAAAGACGCCGAC GAAGAACAACGCCGCATCCATACTGTCAACACTGGCATCCTCTGTGCTGAATCAACGGCACTACGCCGTTGGCTAAGCAA ACTATCAAATACCAATATGCAGGGGGAATACTACCTGACCGACATCTTTGCCAGCGCCACAGCCGACCTCACACCAGCCA ACATGATCATGGTTACCGATGCTCAAGAAGTGGAAGGCGTCAATGATCTTTGGCAACTCACCCAACTGGAACGCGCCTGG CAAATACGCGCTGCACGTGCCTTGTGCCTGCAAGGCGCACGCGTGGCCGATCCAGCAAGACTGGACCAACGAGGCACAAT ACGCATCGGACAGAATGTCCACATTGATATTGACGTTGTGCTAGAAGGAGAAATCGAACTCGGTGATAACGTCGTAATTG GCCCATTCGTGCGACTGAAGAACGTAAAACTTGGACCTGGTACCAAAGTACACGCACACTGTGATCTGGAAGGCGTCACC ACAACGGGCTCAGCACTCATCGGTCCATTTGCACGCCTGCGTCCGGAAACAATGCTGGCCGACGGCGTGCACATCGGTAA CTTTGTCGAGACAAAAAACACGTCAATAGGTGCCGATAGTAAAGCCAATCACCTAACTTACTTGGGCGACGCACAAATCG GCACCAAGGTAAACATTGGTGCTGGCACCATCACTTGCAACTACGACGGCGTCAATAAATCGATCACACTGATCGGTGAT GGCGCCTTCATTGGCTCACACTCGGCACTGATAGCACCCGTCAGTGTGGGTGCTGGCGCCACACTCGGTGCCGGAACAGT ACTGACCCATGATGCACCAGCCCATCAACTTACTGTGGCGCGCGCACGTCAAACCACACTGGACGGCTGGCAACGCCCGA AAAAGAAAACCTAG
Upstream 100 bases:
>100_bases TGGTACGTTTTACTAAAGTAATGACGCATCATAAGTAGCGCCCCTCCCACTATGGTTGGAGTGCCTAGAATGCAAATCTC GCTGAAACCGGACGCTACCA
Downstream 100 bases:
>100_bases ATACACAAGACGTAACATAATGCTCATCCCTCCTTGTAACGCCTTTCATTCCTGCTTTTCCCGATACAAACTCGTGATGG CGACGTTGATTGGATAATAT
Product: UDP-N-acetylglucosamine pyrophosphorylase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MPLSLPLHIVILAAGEGKRMKSALPKVLHPIAGKPMLAHVITTARALTPDAIHVVYGHAGNQVRAAFADQTDLHWVEQTQ QLGTGHAVKQTMSAIPNAANVLVLYGDVPLIRAETLQRLPRASTPIAVLVTELANPAGYGHIVRNSEGKVAAIIEDKDAD EEQRRIHTVNTGILCAESTALRRWLSKLSNTNMQGEYYLTDIFASATADLTPANMIMVTDAQEVEGVNDLWQLTQLERAW QIRAARALCLQGARVADPARLDQRGTIRIGQNVHIDIDVVLEGEIELGDNVVIGPFVRLKNVKLGPGTKVHAHCDLEGVT TTGSALIGPFARLRPETMLADGVHIGNFVETKNTSIGADSKANHLTYLGDAQIGTKVNIGAGTITCNYDGVNKSITLIGD GAFIGSHSALIAPVSVGAGATLGAGTVLTHDAPAHQLTVARARQTTLDGWQRPKKKT
Sequences:
>Translated_457_residues MPLSLPLHIVILAAGEGKRMKSALPKVLHPIAGKPMLAHVITTARALTPDAIHVVYGHAGNQVRAAFADQTDLHWVEQTQ QLGTGHAVKQTMSAIPNAANVLVLYGDVPLIRAETLQRLPRASTPIAVLVTELANPAGYGHIVRNSEGKVAAIIEDKDAD EEQRRIHTVNTGILCAESTALRRWLSKLSNTNMQGEYYLTDIFASATADLTPANMIMVTDAQEVEGVNDLWQLTQLERAW QIRAARALCLQGARVADPARLDQRGTIRIGQNVHIDIDVVLEGEIELGDNVVIGPFVRLKNVKLGPGTKVHAHCDLEGVT TTGSALIGPFARLRPETMLADGVHIGNFVETKNTSIGADSKANHLTYLGDAQIGTKVNIGAGTITCNYDGVNKSITLIGD GAFIGSHSALIAPVSVGAGATLGAGTVLTHDAPAHQLTVARARQTTLDGWQRPKKKT >Mature_456_residues PLSLPLHIVILAAGEGKRMKSALPKVLHPIAGKPMLAHVITTARALTPDAIHVVYGHAGNQVRAAFADQTDLHWVEQTQQ LGTGHAVKQTMSAIPNAANVLVLYGDVPLIRAETLQRLPRASTPIAVLVTELANPAGYGHIVRNSEGKVAAIIEDKDADE EQRRIHTVNTGILCAESTALRRWLSKLSNTNMQGEYYLTDIFASATADLTPANMIMVTDAQEVEGVNDLWQLTQLERAWQ IRAARALCLQGARVADPARLDQRGTIRIGQNVHIDIDVVLEGEIELGDNVVIGPFVRLKNVKLGPGTKVHAHCDLEGVTT TGSALIGPFARLRPETMLADGVHIGNFVETKNTSIGADSKANHLTYLGDAQIGTKVNIGAGTITCNYDGVNKSITLIGDG AFIGSHSALIAPVSVGAGATLGAGTVLTHDAPAHQLTVARARQTTLDGWQRPKKKT
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-GlcNAc. Responsible for the acetylation of Glc-N-1-P to give GlcNAc-1-P and for the uridyl transfer from UTP to GlcNAc-1-P which produces UDP-GlcNAc
COG id: COG1207
COG function: function code M; N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family
Homologues:
Organism=Escherichia coli, GI1790168, Length=457, Percent_Identity=49.2341356673961, Blast_Score=431, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMU_XYLF2 (B2I874)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001829142.1 - ProteinModelPortal: B2I874 - SMR: B2I874 - GeneID: 6202936 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_0421 - HOGENOM: HBG688195 - OMA: GSKVNHL - ProtClustDB: CLSK446185 - GO: GO:0005737 - HAMAP: MF_01631 - InterPro: IPR005882 - InterPro: IPR005835 - InterPro: IPR011004 - TIGRFAMs: TIGR01173
Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like
EC number: =2.7.7.23; =2.3.1.157
Molecular weight: Translated: 48749; Mature: 48618
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: ACT_SITE 364-364 BINDING 78-78 BINDING 140-140 BINDING 155-155 BINDING 170-170 BINDING 388-388 BINDING 406-406 BINDING 424-424 BINDING 441-441
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSLPLHIVILAAGEGKRMKSALPKVLHPIAGKPMLAHVITTARALTPDAIHVVYGHAG CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCC NQVRAAFADQTDLHWVEQTQQLGTGHAVKQTMSAIPNAANVLVLYGDVPLIRAETLQRLP CEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHCC RASTPIAVLVTELANPAGYGHIVRNSEGKVAAIIEDKDADEEQRRIHTVNTGILCAESTA CCCCCHHHHEEHHCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHEEEECCCEEEECHHH LRRWLSKLSNTNMQGEYYLTDIFASATADLTPANMIMVTDAQEVEGVNDLWQLTQLERAW HHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHHH QIRAARALCLQGARVADPARLDQRGTIRIGQNVHIDIDVVLEGEIELGDNVVIGPFVRLK HHHHHHHHHHCCCCCCCCHHCCCCCCEEECCEEEEEEEEEEECCEEECCCEEEECEEEEE NVKLGPGTKVHAHCDLEGVTTTGSALIGPFARLRPETMLADGVHIGNFVETKNTSIGADS EEECCCCCEEEEEECCCCCEECCCHHHHHHHHCCCCHHHCCCCEECCEEECCCCCCCCCC KANHLTYLGDAQIGTKVNIGAGTITCNYDGVNKSITLIGDGAFIGSHSALIAPVSVGAGA CCCEEEEEECCCCCCEEEECCEEEEEEECCCCCEEEEEECCEEECCCCEEEEEEECCCCC TLGAGTVLTHDAPAHQLTVARARQTTLDGWQRPKKKT CCCCCEEEECCCCCHHEEHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PLSLPLHIVILAAGEGKRMKSALPKVLHPIAGKPMLAHVITTARALTPDAIHVVYGHAG CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCC NQVRAAFADQTDLHWVEQTQQLGTGHAVKQTMSAIPNAANVLVLYGDVPLIRAETLQRLP CEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHCC RASTPIAVLVTELANPAGYGHIVRNSEGKVAAIIEDKDADEEQRRIHTVNTGILCAESTA CCCCCHHHHEEHHCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHEEEECCCEEEECHHH LRRWLSKLSNTNMQGEYYLTDIFASATADLTPANMIMVTDAQEVEGVNDLWQLTQLERAW HHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHHH QIRAARALCLQGARVADPARLDQRGTIRIGQNVHIDIDVVLEGEIELGDNVVIGPFVRLK HHHHHHHHHHCCCCCCCCHHCCCCCCEEECCEEEEEEEEEEECCEEECCCEEEECEEEEE NVKLGPGTKVHAHCDLEGVTTTGSALIGPFARLRPETMLADGVHIGNFVETKNTSIGADS EEECCCCCEEEEEECCCCCEECCCHHHHHHHHCCCCHHHCCCCEECCEEECCCCCCCCCC KANHLTYLGDAQIGTKVNIGAGTITCNYDGVNKSITLIGDGAFIGSHSALIAPVSVGAGA CCCEEEEEECCCCCCEEEECCEEEEEEECCCCCEEEEEECCEEECCCCEEEEEEECCCCC TLGAGTVLTHDAPAHQLTVARARQTTLDGWQRPKKKT CCCCCEEEECCCCCHHEEHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA