Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182680965
Identifier: 182680965
GI number: 182680965
Start: 503020
End: 504381
Strand: Direct
Name: 182680965
Synonym: XfasM23_0403
Alternate gene names: NA
Gene position: 503020-504381 (Clockwise)
Preceding gene: 182680964
Following gene: 182680966
Centisome position: 19.84
GC content: 54.33
Gene sequence:
>1362_bases ATGACGTCCACTTTTGATACATCCCAGATCTCTGCATTTCGCTTTGTGCGCTGCACATTGGATGCACAGACCGGCGTTGT TTCTTTGGTGTATGCCTTTGACCAGGGACCGGAATTTGTGGAAAAAATCATGGTTCCGGGCGCTCCGTTTGCCTTGGAGG GGCAGCGCGCCGAGGCCGTACGCCAGGCATTGCGCCTGCTGCACCTGATTGCTGGTGTGAGTTATTACAAAGCAATCGTT CCGTCCACAGTGACGATGGATGATGATTCCATAGATGCTGAGACTGCTGCCCTTGTGGAGGAGGTGTACTTGTATGGACT GAGCGAATTCGCATATCGCAATGGATTGAACCTGCATGGTCGCTTCCAATTGCCGGTGCAAGCCACCGGGGCAATGGCCC CTGCACCGCAGCTCGGTTTGCGTGAACACGCTCTGGTAGCGATTGGTGGCGGTAAGGATTCCTTGGTCAGTATTGAGGCA TTGCGTGTCGCCGGTATGCAGCAAACGGTGGTGTGGATCGGTGCTTCGCAATTGATCCGTGCCTGCGCTGAGCGCTCAGA ACTTCAGATGCTCAACGTTGGACGTACCTTAGCGCCAGAATTATTCGCGTTAAACCGCAAAGGTGCCTGGAACGGACATA TCCCGGTGACCGCCATCAACTCGGCAATCTTGGTATTAGTTGCCTTACTACATGGTGTCGATCAAGTTGTATTTTCCAAC GAGCGTTCCGCCAGCTATGGCAGTGTTATCCCCGGCACCGGCGAAGTGAACCATCAATGGTCCAAGAGCTGGGCATTCGA GCAGCATTTCAGTGACTATGTACAGCGCCGTGTTGCTGCTGACCTGCGTTACTACTCCTTATTGCGTCCTCTCTCGGAAT TGGCAGTAGCGCGGCAGTTTGCACACTGTGCCCGCTACGATGCCTATTTCTCGAGTTGCAATCGTAATTTCCACATCTTG GGTGAACGTCCCGCGCATCGTTGGTGCGGACAGTGTCCCAAGTGCCATTTTGTGTTCTTGGCGTTGGCACCGTTCATGCC CAAGACCCGCCTCGTAGGGATCTTTGGCCGTAACTTGTTGGATGATGCTAGCCAAGCCAGCGGTTTTGATGCCTTGCTGG AATGGCAGGATTACAAGCCTTTCGAGTGTGTCGGCGAAGCACGCGAGTCTCGTACCGCGCTGGCCGTGCTGGCGACACGT GCGGAATGGAAGGAAGATGCTTTGGTGATGCGCTTCATGCGTGAAATCCAGCCGCATCTGGATCCTGCACAGTTACAGTT AGACCCCTTGCTGACGTTGTCCGATGAGCATCGCATCCCAGCATCCCTATGGGAGTCCATGAGTGCGCATTTCCGCACTT GA
Upstream 100 bases:
>100_bases TGATGCCTGAGTGGTGTTGTGGTCCGGTTGTAACGACAATCATGCAGGTTGTGCATCCTGTTACATGCGGACTGTTGACC TGTCCGTTCAGGGATTTTTC
Downstream 100 bases:
>100_bases AGGCTGCCGTGTCGCGTTGTGGGGCTGGGGGCGCGAAAGTCGTGCCGCTTACCGTGCATTTCGTGCCGCGTTTCCGAAAC AACCATTAACGTTGTTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MTSTFDTSQISAFRFVRCTLDAQTGVVSLVYAFDQGPEFVEKIMVPGAPFALEGQRAEAVRQALRLLHLIAGVSYYKAIV PSTVTMDDDSIDAETAALVEEVYLYGLSEFAYRNGLNLHGRFQLPVQATGAMAPAPQLGLREHALVAIGGGKDSLVSIEA LRVAGMQQTVVWIGASQLIRACAERSELQMLNVGRTLAPELFALNRKGAWNGHIPVTAINSAILVLVALLHGVDQVVFSN ERSASYGSVIPGTGEVNHQWSKSWAFEQHFSDYVQRRVAADLRYYSLLRPLSELAVARQFAHCARYDAYFSSCNRNFHIL GERPAHRWCGQCPKCHFVFLALAPFMPKTRLVGIFGRNLLDDASQASGFDALLEWQDYKPFECVGEARESRTALAVLATR AEWKEDALVMRFMREIQPHLDPAQLQLDPLLTLSDEHRIPASLWESMSAHFRT
Sequences:
>Translated_453_residues MTSTFDTSQISAFRFVRCTLDAQTGVVSLVYAFDQGPEFVEKIMVPGAPFALEGQRAEAVRQALRLLHLIAGVSYYKAIV PSTVTMDDDSIDAETAALVEEVYLYGLSEFAYRNGLNLHGRFQLPVQATGAMAPAPQLGLREHALVAIGGGKDSLVSIEA LRVAGMQQTVVWIGASQLIRACAERSELQMLNVGRTLAPELFALNRKGAWNGHIPVTAINSAILVLVALLHGVDQVVFSN ERSASYGSVIPGTGEVNHQWSKSWAFEQHFSDYVQRRVAADLRYYSLLRPLSELAVARQFAHCARYDAYFSSCNRNFHIL GERPAHRWCGQCPKCHFVFLALAPFMPKTRLVGIFGRNLLDDASQASGFDALLEWQDYKPFECVGEARESRTALAVLATR AEWKEDALVMRFMREIQPHLDPAQLQLDPLLTLSDEHRIPASLWESMSAHFRT >Mature_452_residues TSTFDTSQISAFRFVRCTLDAQTGVVSLVYAFDQGPEFVEKIMVPGAPFALEGQRAEAVRQALRLLHLIAGVSYYKAIVP STVTMDDDSIDAETAALVEEVYLYGLSEFAYRNGLNLHGRFQLPVQATGAMAPAPQLGLREHALVAIGGGKDSLVSIEAL RVAGMQQTVVWIGASQLIRACAERSELQMLNVGRTLAPELFALNRKGAWNGHIPVTAINSAILVLVALLHGVDQVVFSNE RSASYGSVIPGTGEVNHQWSKSWAFEQHFSDYVQRRVAADLRYYSLLRPLSELAVARQFAHCARYDAYFSSCNRNFHILG ERPAHRWCGQCPKCHFVFLALAPFMPKTRLVGIFGRNLLDDASQASGFDALLEWQDYKPFECVGEARESRTALAVLATRA EWKEDALVMRFMREIQPHLDPAQLQLDPLLTLSDEHRIPASLWESMSAHFRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50346; Mature: 50215
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTFDTSQISAFRFVRCTLDAQTGVVSLVYAFDQGPEFVEKIMVPGAPFALEGQRAEAV CCCCCCCHHHHHEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCEECCHHHHHH RQALRLLHLIAGVSYYKAIVPSTVTMDDDSIDAETAALVEEVYLYGLSEFAYRNGLNLHG HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE RFQLPVQATGAMAPAPQLGLREHALVAIGGGKDSLVSIEALRVAGMQQTVVWIGASQLIR EEECCEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHCCCHHEEEEECHHHHHH ACAERSELQMLNVGRTLAPELFALNRKGAWNGHIPVTAINSAILVLVALLHGVDQVVFSN HHHHHHHHHHHHCCCHHCCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC ERSASYGSVIPGTGEVNHQWSKSWAFEQHFSDYVQRRVAADLRYYSLLRPLSELAVARQF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHCARYDAYFSSCNRNFHILGERPAHRWCGQCPKCHFVFLALAPFMPKTRLVGIFGRNLL HHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHH DDASQASGFDALLEWQDYKPFECVGEARESRTALAVLATRAEWKEDALVMRFMREIQPHL HHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPAQLQLDPLLTLSDEHRIPASLWESMSAHFRT CHHHEEECCCEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TSTFDTSQISAFRFVRCTLDAQTGVVSLVYAFDQGPEFVEKIMVPGAPFALEGQRAEAV CCCCCCHHHHHEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCEECCHHHHHH RQALRLLHLIAGVSYYKAIVPSTVTMDDDSIDAETAALVEEVYLYGLSEFAYRNGLNLHG HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE RFQLPVQATGAMAPAPQLGLREHALVAIGGGKDSLVSIEALRVAGMQQTVVWIGASQLIR EEECCEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHCCCHHEEEEECHHHHHH ACAERSELQMLNVGRTLAPELFALNRKGAWNGHIPVTAINSAILVLVALLHGVDQVVFSN HHHHHHHHHHHHCCCHHCCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC ERSASYGSVIPGTGEVNHQWSKSWAFEQHFSDYVQRRVAADLRYYSLLRPLSELAVARQF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHCARYDAYFSSCNRNFHILGERPAHRWCGQCPKCHFVFLALAPFMPKTRLVGIFGRNLL HHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHH DDASQASGFDALLEWQDYKPFECVGEARESRTALAVLATRAEWKEDALVMRFMREIQPHL HHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPAQLQLDPLLTLSDEHRIPASLWESMSAHFRT CHHHEEECCCEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA