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The map label for this gene is recJ [H]

Identifier: 182680958

GI number: 182680958

Start: 490418

End: 492226

Strand: Direct

Name: recJ [H]

Synonym: XfasM23_0396

Alternate gene names: 182680958

Gene position: 490418-492226 (Clockwise)

Preceding gene: 182680957

Following gene: 182680959

Centisome position: 19.34

GC content: 54.89

Gene sequence:

>1809_bases
GTGCCCAAGATTATTCGCCGTCTCTCTTTGCCGCTGGTTGTTTGGCCTGACAATGTGCCGCCATTGCTACGACGTGTGTA
CACGGCACGTGGTTGTGCTGATCCGGTGACGGCGCAACCCTGTCTCGCTCAGTTGTTGTCACCCGCCATGCTGAGCAACA
TGCAGGCAGCCACTGTATTGCTGACTGAGGTCATCAAGGCCAATGGGCGTATTCTGGTTGTCGGTGATTTTGACTGCGAT
GGTGCAACTGCCTGTGCGGTTGCGGTGCGTGGTTTGCGTTTGCTTGGCGCGCGTAACGTGATGCATGCGGTCCCCAATCG
TATGGTGCATGGTTACGGTTTGTCGTCGGCATTGGTTGAGGAGTTGGCACCGTTGCAGCCAGCGTTGCTTGTTACGGTGG
ATCACGGCATTGCTTGCCATGCTGGCATTGCTGCTGCTAAGGCCCGCGGTTGGAAGGTGTTGGTGACTGATCACCATTTG
CCGGGTGAAACCTTGCCAGCAGCCGATGTCATTGTTAATCCGAATCTGCCTGGCGATTTGTTTCCGAGTAAAACGCTGGC
GGGTGTCGGGGTGATCTTTTATGTACTGCTTGCGCTGCGTGCGCGTCTTTATCCTGCTGCTCGTGCTGAGTGCGAAGGTC
AAGAAACGCGTATTCACAGTTCTATTTCTCAGAAAAACCGTCCTGATTTGACGTCCTTACTGGATTTAGTTGCGGTCGGG
ACGGTTGCCGACTTGGTGCCTTTAGATACGAATAATCGTGCTTTGGTTGCTGCCGGCTTGCGCCGGTTGCGTCGTGGTCA
AGGGTGTCTCGGACTACGCGCGTTGATCGAGGTCAGTGGCCGTGATGAGTCGCAATTGACCGCTACTGATATTGGTTTTG
CATTGAGTCCGCGTCTGAACGCTGCGGGACGGTTGGAGGATATGGCGTTGGGCATTGAATTGTTGCTCACTGAGGATTGG
ACTCGCGCGCGTGCTATCGCAGCCATGCTTGAGGAGATTAATGCCGCACGCCGTGTGGTACAGCAGGGTATGAGTGACGA
TGCTGAGCAGGCAGTAGCGCAAGCGATGGCGCAGTCAGGCGGTGTGTTGCCAATGGCGGTGTGCCTGTTCGATCCGGACT
GGCATCCAGGAGTGATTGGTTTGGTCGCGTCCAAGATGAAGGACAAAATGCACCGTCCGGTGGTGGCTTTAGCACCGGCT
GAGCCGGGAGGTACAGTGTTGCGAGGGTCGGCACGGTCGATCCCAGGACTGCATATCCGCGATGTATTGGTGGCGCTCGA
CAGTGGTTATCCCGGGATGATTCAGAAATTTGGAGGTCATGCGATGGCGGCCGGCTTGACACTGGATGCGGAGGTGTTGC
CGGTGTTCGAACGTGTATTTCGTGCCCAAGTTGAGATGATGGTTGATAAGAATGTGTTGCAGGCTGAGTTGTATAGCGAT
GGTGAATTGGCGGCCGATGAGCTGGACGCATTACATGCGCGGGCATTGCGGCTGGGTGGGCCATGGGGACAGGGGTTTCC
AGAGCCATTGTTTGATGGAGAGTTTGAAGTGCTGCAATGGCGTGTCCTCAAGGAGCGTCATTTGAAAATGGAGGTGCGTT
ATTCAGGACGGCATGACGCTCTGAACGCTATTTATTTCAACGGCTGGCAGGGTGATCCTCCAGCACGGCGATTGCGTTTG
GCATATCGGTTGGTTTGCGACGATTACCGCGGTGGTGATGCGATTCAGTTGATCGTGGAATATGCGGAAGTGATTGAATG
TGATGTATTGGGTTCCCAAGCAATTTCCAGTGGCCTACTTGATCCTTAG

Upstream 100 bases:

>100_bases
AATTGGTACTGGATTTTCGGGATGGAGAAATTTTCACCATGACCCGTGCGCACCGTTGGCGTTTTTGGTGTGGTGTGCGT
ACTCAGCTGGCCGATTGAGC

Downstream 100 bases:

>100_bases
GTTGGTGCAGATGGAGTGTTGCGATGAGCACGTTCAAACTTATTGAGGGTGGGAAGCTGCTTGAAGAGATGTAGTAGTGG
TGGCACTCACGATGCACCAA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 601

Protein sequence:

>602_residues
MPKIIRRLSLPLVVWPDNVPPLLRRVYTARGCADPVTAQPCLAQLLSPAMLSNMQAATVLLTEVIKANGRILVVGDFDCD
GATACAVAVRGLRLLGARNVMHAVPNRMVHGYGLSSALVEELAPLQPALLVTVDHGIACHAGIAAAKARGWKVLVTDHHL
PGETLPAADVIVNPNLPGDLFPSKTLAGVGVIFYVLLALRARLYPAARAECEGQETRIHSSISQKNRPDLTSLLDLVAVG
TVADLVPLDTNNRALVAAGLRRLRRGQGCLGLRALIEVSGRDESQLTATDIGFALSPRLNAAGRLEDMALGIELLLTEDW
TRARAIAAMLEEINAARRVVQQGMSDDAEQAVAQAMAQSGGVLPMAVCLFDPDWHPGVIGLVASKMKDKMHRPVVALAPA
EPGGTVLRGSARSIPGLHIRDVLVALDSGYPGMIQKFGGHAMAAGLTLDAEVLPVFERVFRAQVEMMVDKNVLQAELYSD
GELAADELDALHARALRLGGPWGQGFPEPLFDGEFEVLQWRVLKERHLKMEVRYSGRHDALNAIYFNGWQGDPPARRLRL
AYRLVCDDYRGGDAIQLIVEYAEVIECDVLGSQAISSGLLDP

Sequences:

>Translated_602_residues
MPKIIRRLSLPLVVWPDNVPPLLRRVYTARGCADPVTAQPCLAQLLSPAMLSNMQAATVLLTEVIKANGRILVVGDFDCD
GATACAVAVRGLRLLGARNVMHAVPNRMVHGYGLSSALVEELAPLQPALLVTVDHGIACHAGIAAAKARGWKVLVTDHHL
PGETLPAADVIVNPNLPGDLFPSKTLAGVGVIFYVLLALRARLYPAARAECEGQETRIHSSISQKNRPDLTSLLDLVAVG
TVADLVPLDTNNRALVAAGLRRLRRGQGCLGLRALIEVSGRDESQLTATDIGFALSPRLNAAGRLEDMALGIELLLTEDW
TRARAIAAMLEEINAARRVVQQGMSDDAEQAVAQAMAQSGGVLPMAVCLFDPDWHPGVIGLVASKMKDKMHRPVVALAPA
EPGGTVLRGSARSIPGLHIRDVLVALDSGYPGMIQKFGGHAMAAGLTLDAEVLPVFERVFRAQVEMMVDKNVLQAELYSD
GELAADELDALHARALRLGGPWGQGFPEPLFDGEFEVLQWRVLKERHLKMEVRYSGRHDALNAIYFNGWQGDPPARRLRL
AYRLVCDDYRGGDAIQLIVEYAEVIECDVLGSQAISSGLLDP
>Mature_601_residues
PKIIRRLSLPLVVWPDNVPPLLRRVYTARGCADPVTAQPCLAQLLSPAMLSNMQAATVLLTEVIKANGRILVVGDFDCDG
ATACAVAVRGLRLLGARNVMHAVPNRMVHGYGLSSALVEELAPLQPALLVTVDHGIACHAGIAAAKARGWKVLVTDHHLP
GETLPAADVIVNPNLPGDLFPSKTLAGVGVIFYVLLALRARLYPAARAECEGQETRIHSSISQKNRPDLTSLLDLVAVGT
VADLVPLDTNNRALVAAGLRRLRRGQGCLGLRALIEVSGRDESQLTATDIGFALSPRLNAAGRLEDMALGIELLLTEDWT
RARAIAAMLEEINAARRVVQQGMSDDAEQAVAQAMAQSGGVLPMAVCLFDPDWHPGVIGLVASKMKDKMHRPVVALAPAE
PGGTVLRGSARSIPGLHIRDVLVALDSGYPGMIQKFGGHAMAAGLTLDAEVLPVFERVFRAQVEMMVDKNVLQAELYSDG
ELAADELDALHARALRLGGPWGQGFPEPLFDGEFEVLQWRVLKERHLKMEVRYSGRHDALNAIYFNGWQGDPPARRLRLA
YRLVCDDYRGGDAIQLIVEYAEVIECDVLGSQAISSGLLDP

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=570, Percent_Identity=45.7894736842105, Blast_Score=484, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 64818; Mature: 64687

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIIRRLSLPLVVWPDNVPPLLRRVYTARGCADPVTAQPCLAQLLSPAMLSNMQAATVL
CCHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHCHHHHHHH
LTEVIKANGRILVVGDFDCDGATACAVAVRGLRLLGARNVMHAVPNRMVHGYGLSSALVE
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHH
ELAPLQPALLVTVDHGIACHAGIAAAKARGWKVLVTDHHLPGETLPAADVIVNPNLPGDL
HHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCC
FPSKTLAGVGVIFYVLLALRARLYPAARAECEGQETRIHSSISQKNRPDLTSLLDLVAVG
CCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
TVADLVPLDTNNRALVAAGLRRLRRGQGCLGLRALIEVSGRDESQLTATDIGFALSPRLN
HHHHHEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEHHHCCEEECCCCC
AAGRLEDMALGIELLLTEDWTRARAIAAMLEEINAARRVVQQGMSDDAEQAVAQAMAQSG
CCCCHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
GVLPMAVCLFDPDWHPGVIGLVASKMKDKMHRPVVALAPAEPGGTVLRGSARSIPGLHIR
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCCCCCCHHH
DVLVALDSGYPGMIQKFGGHAMAAGLTLDAEVLPVFERVFRAQVEMMVDKNVLQAELYSD
HHHHHHCCCCCHHHHHHCCCEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GELAADELDALHARALRLGGPWGQGFPEPLFDGEFEVLQWRVLKERHLKMEVRYSGRHDA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCC
LNAIYFNGWQGDPPARRLRLAYRLVCDDYRGGDAIQLIVEYAEVIECDVLGSQAISSGLL
EEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCC
DP
CC
>Mature Secondary Structure 
PKIIRRLSLPLVVWPDNVPPLLRRVYTARGCADPVTAQPCLAQLLSPAMLSNMQAATVL
CHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHCHHHHHHH
LTEVIKANGRILVVGDFDCDGATACAVAVRGLRLLGARNVMHAVPNRMVHGYGLSSALVE
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHH
ELAPLQPALLVTVDHGIACHAGIAAAKARGWKVLVTDHHLPGETLPAADVIVNPNLPGDL
HHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCC
FPSKTLAGVGVIFYVLLALRARLYPAARAECEGQETRIHSSISQKNRPDLTSLLDLVAVG
CCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
TVADLVPLDTNNRALVAAGLRRLRRGQGCLGLRALIEVSGRDESQLTATDIGFALSPRLN
HHHHHEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEHHHCCEEECCCCC
AAGRLEDMALGIELLLTEDWTRARAIAAMLEEINAARRVVQQGMSDDAEQAVAQAMAQSG
CCCCHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
GVLPMAVCLFDPDWHPGVIGLVASKMKDKMHRPVVALAPAEPGGTVLRGSARSIPGLHIR
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCCCCCCHHH
DVLVALDSGYPGMIQKFGGHAMAAGLTLDAEVLPVFERVFRAQVEMMVDKNVLQAELYSD
HHHHHHCCCCCHHHHHHCCCEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GELAADELDALHARALRLGGPWGQGFPEPLFDGEFEVLQWRVLKERHLKMEVRYSGRHDA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCC
LNAIYFNGWQGDPPARRLRLAYRLVCDDYRGGDAIQLIVEYAEVIECDVLGSQAISSGLL
EEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCC
DP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]