Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680957
Identifier: 182680957
GI number: 182680957
Start: 489495
End: 490415
Strand: Direct
Name: 182680957
Synonym: XfasM23_0395
Alternate gene names: NA
Gene position: 489495-490415 (Clockwise)
Preceding gene: 182680956
Following gene: 182680958
Centisome position: 19.3
GC content: 57.44
Gene sequence:
>921_bases ATGTCCAGTGTCACGCTGTTGTTGCCGGAGCGTCATTGCTTGCTAGGTACGTTGCGGGGTGACGCGGTTGTGCGGGCGCT GGCGCGTGCTGATCGTATCACTGGGGGTTGTGGGGAGCGTGCTCAATTGGGCCGTCACTTTGAACTTGTTCCTGCGTCCT GGCCAGTGGCCGCCTTAACCCGCCAGATAGATGTTGGTGATGCGGCAGGTGCGGCTTGGGTGCGTGCGGATCCTGCCTAT GTGGTGCCGGATATGGGTGCGGCACGGTTGGTGGCCTGTGGTGAGATGTTGGCATTGGACGCTAAGGACCAAGCTGCATT GTTGCCAGAGTTGCAGACCTTGTTCAGTGAAGCCGGTTTGTTGCTGGATGCGCCAACGCCAGCACGGTGGTACGTGCAGC TGACTCCAGAGGCTTGTTTGCCCGCATTCTCCGCCCCGGAGGATGTCCTTGGTGATGACCTGTTTAATCACTTGCCCGAT GGTGACATGGGGCGTTGCTGGAGGGCGTTGTTAACCGAGGTCCAGGTGTTATTGCATCAACATGCGTGGAACGTTGAGCG CGTTGCGCGTGGTAAGCAGATGATCAACTCGCTGTGGTTTTGGGGAGCAGGTGTGTTACCGCATACGGTGATGACGCCGC ACCGACAGGTGCGCAGCCGTGATGTGCTGCTGCATGCCTTGGCGAAGGCCTCTGGATCTGATACCGACAGTCTGCACATG GTGGATGCATTGGTTGATCTGCGTCACCTGTGCTCGTTGACGCAATTTAGCGATGAGGTAGTTGCTCCTTTGTTGGCGGC GATGGGGCGTGGCGAATTAAAGCAATTGGTACTGGATTTTCGGGATGGAGAAATTTTCACCATGACCCGTGCGCACCGTT GGCGTTTTTGGTGTGGTGTGCGTACTCAGCTGGCCGATTGA
Upstream 100 bases:
>100_bases CTGATTGGCAAACAAGAGGGCGATACGATCGTGATTGAGGCGCCTGCTGGCCGACGTGAGTACGAGGTGGTTGCGGTGGA ATACATCAGCTGATTCTGTC
Downstream 100 bases:
>100_bases GCGTGCCCAAGATTATTCGCCGTCTCTCTTTGCCGCTGGTTGTTTGGCCTGACAATGTGCCGCCATTGCTACGACGTGTG TACACGGCACGTGGTTGTGC
Product: regulatory protein
Products: NA
Alternate protein names: 2 3-Bisphosphoglycerate-Independent Phosphoglycerate Mutase; Regulatory Protein RpfE; Regulatory Protein Rpfe; Regulatory Protein
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSSVTLLLPERHCLLGTLRGDAVVRALARADRITGGCGERAQLGRHFELVPASWPVAALTRQIDVGDAAGAAWVRADPAY VVPDMGAARLVACGEMLALDAKDQAALLPELQTLFSEAGLLLDAPTPARWYVQLTPEACLPAFSAPEDVLGDDLFNHLPD GDMGRCWRALLTEVQVLLHQHAWNVERVARGKQMINSLWFWGAGVLPHTVMTPHRQVRSRDVLLHALAKASGSDTDSLHM VDALVDLRHLCSLTQFSDEVVAPLLAAMGRGELKQLVLDFRDGEIFTMTRAHRWRFWCGVRTQLAD
Sequences:
>Translated_306_residues MSSVTLLLPERHCLLGTLRGDAVVRALARADRITGGCGERAQLGRHFELVPASWPVAALTRQIDVGDAAGAAWVRADPAY VVPDMGAARLVACGEMLALDAKDQAALLPELQTLFSEAGLLLDAPTPARWYVQLTPEACLPAFSAPEDVLGDDLFNHLPD GDMGRCWRALLTEVQVLLHQHAWNVERVARGKQMINSLWFWGAGVLPHTVMTPHRQVRSRDVLLHALAKASGSDTDSLHM VDALVDLRHLCSLTQFSDEVVAPLLAAMGRGELKQLVLDFRDGEIFTMTRAHRWRFWCGVRTQLAD >Mature_305_residues SSVTLLLPERHCLLGTLRGDAVVRALARADRITGGCGERAQLGRHFELVPASWPVAALTRQIDVGDAAGAAWVRADPAYV VPDMGAARLVACGEMLALDAKDQAALLPELQTLFSEAGLLLDAPTPARWYVQLTPEACLPAFSAPEDVLGDDLFNHLPDG DMGRCWRALLTEVQVLLHQHAWNVERVARGKQMINSLWFWGAGVLPHTVMTPHRQVRSRDVLLHALAKASGSDTDSLHMV DALVDLRHLCSLTQFSDEVVAPLLAAMGRGELKQLVLDFRDGEIFTMTRAHRWRFWCGVRTQLAD
Specific function: Unknown
COG id: COG4255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33618; Mature: 33487
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVTLLLPERHCLLGTLRGDAVVRALARADRITGGCGERAQLGRHFELVPASWPVAALT CCCEEEEECCCCHHEEEHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCCCHHHHH RQIDVGDAAGAAWVRADPAYVVPDMGAARLVACGEMLALDAKDQAALLPELQTLFSEAGL HHCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCE LLDAPTPARWYVQLTPEACLPAFSAPEDVLGDDLFNHLPDGDMGRCWRALLTEVQVLLHQ EEECCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH HAWNVERVARGKQMINSLWFWGAGVLPHTVMTPHRQVRSRDVLLHALAKASGSDTDSLHM HCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH VDALVDLRHLCSLTQFSDEVVAPLLAAMGRGELKQLVLDFRDGEIFTMTRAHRWRFWCGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCEEEEECC RTQLAD HHHCCC >Mature Secondary Structure SSVTLLLPERHCLLGTLRGDAVVRALARADRITGGCGERAQLGRHFELVPASWPVAALT CCEEEEECCCCHHEEEHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCCCHHHHH RQIDVGDAAGAAWVRADPAYVVPDMGAARLVACGEMLALDAKDQAALLPELQTLFSEAGL HHCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCE LLDAPTPARWYVQLTPEACLPAFSAPEDVLGDDLFNHLPDGDMGRCWRALLTEVQVLLHQ EEECCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH HAWNVERVARGKQMINSLWFWGAGVLPHTVMTPHRQVRSRDVLLHALAKASGSDTDSLHM HCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH VDALVDLRHLCSLTQFSDEVVAPLLAAMGRGELKQLVLDFRDGEIFTMTRAHRWRFWCGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCEEEEECC RTQLAD HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA