Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680951
Identifier: 182680951
GI number: 182680951
Start: 479742
End: 480035
Strand: Reverse
Name: 182680951
Synonym: XfasM23_0389
Alternate gene names: NA
Gene position: 480035-479742 (Counterclockwise)
Preceding gene: 182680963
Following gene: 182680948
Centisome position: 18.93
GC content: 48.3
Gene sequence:
>294_bases ATGAAACACGCACCCCTGATTTTGTTATCCCTACTCATATTTTCTGGCTGCAGCACAAAGGGCGACATACACGCCGATGC ACCCTTAAAACTACATGGAGCTGTAATAACCACCAAAATTATGGGAAACGGTGATCGCGTGGATGAATTCCGGGTAAGCG GACAGCTACGTATGGTCAAGATCACCCCGAAACACGCACCTGCATACTACTTGTACGATCGTAATGGGGATGGCCACCTC GACGGCGACCGCAACATCGTTTCACCCGTATATTGGAACATTTATAGTTGGTGA
Upstream 100 bases:
>100_bases AAACTAATTTACTCATCAGCGCATTCTACGCTGCACACCACAGTGACATCGAAAACGCATACTCTTACCTACCACTGACT TCAGAAGCAAATCGACCACG
Downstream 100 bases:
>100_bases CAGAATGCCCTTTACTTAACAAACATCACCGATTGCTTGGCATATTCACTGGACCACCATCCAACGCAACCACCTCATTG CACAAACCAAGCTGCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MKHAPLILLSLLIFSGCSTKGDIHADAPLKLHGAVITTKIMGNGDRVDEFRVSGQLRMVKITPKHAPAYYLYDRNGDGHL DGDRNIVSPVYWNIYSW
Sequences:
>Translated_97_residues MKHAPLILLSLLIFSGCSTKGDIHADAPLKLHGAVITTKIMGNGDRVDEFRVSGQLRMVKITPKHAPAYYLYDRNGDGHL DGDRNIVSPVYWNIYSW >Mature_97_residues MKHAPLILLSLLIFSGCSTKGDIHADAPLKLHGAVITTKIMGNGDRVDEFRVSGQLRMVKITPKHAPAYYLYDRNGDGHL DGDRNIVSPVYWNIYSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10852; Mature: 10852
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHAPLILLSLLIFSGCSTKGDIHADAPLKLHGAVITTKIMGNGDRVDEFRVSGQLRMVK CCCCHHHHHHHHHHCCCCCCCCEECCCCEEECCEEEEEEEECCCCCCEEEEECCCEEEEE ITPKHAPAYYLYDRNGDGHLDGDRNIVSPVYWNIYSW ECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MKHAPLILLSLLIFSGCSTKGDIHADAPLKLHGAVITTKIMGNGDRVDEFRVSGQLRMVK CCCCHHHHHHHHHHCCCCCCCCEECCCCEEECCEEEEEEEECCCCCCEEEEECCCEEEEE ITPKHAPAYYLYDRNGDGHLDGDRNIVSPVYWNIYSW ECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA