Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680941
Identifier: 182680941
GI number: 182680941
Start: 469387
End: 469959
Strand: Direct
Name: 182680941
Synonym: XfasM23_0379
Alternate gene names: NA
Gene position: 469387-469959 (Clockwise)
Preceding gene: 182680940
Following gene: 182680942
Centisome position: 18.51
GC content: 51.83
Gene sequence:
>573_bases ATGTCTGCAATGGTATGGATCTCTATTTTGTTTTCCGTGTTACCTGTCTCCTGGGCGACAGCGCAGCAGCGATTGACGCT GGATTCAGTGCATTCTTACTTTGAGTTCGAAGTCCGTACTCGTTTAGGGCAGAGCATTGATGGGGTGTTCCCTCGCTTAG AAGGTGAAGTGGTAATCTTGCCGGAGGGGCGCGAGAAAGTACGGTTGCACCTGTATGCAGGCGATGCGCTCATTCCTGGT AGAACCCATTACACTGATTGGGTCCGTGGAGAGCATTTTTTCGATGTTCAGCATTATCCGACAATCGAGTTTGAATCCCA GCCCTATTCCTCTCGGGTGATCCTGCAAGGAGGCAAAATTAGTGGGAGTTTGACAATTCGTGGTATCAGCCGTGATGAAA CCTTGCAGATTCAGCCAGCCGCCTGTGCTCGGCCTGGTTATGATTGCGACCTGGTCGGTACTGGCGTTGTGTTGCGTGAG CGTTATGGCATTGACGGTTGGCGGTTAATACTTGGCAATCGGGTGACCTTCCGTTGGCATGGCCGTTTGATCGAGGGGCC GCCAAGTCATTGA
Upstream 100 bases:
>100_bases GGGATGTCTACTGGCTCGATTGCGTTGCTGACGTTGCCATTGAAGACGGGCATTGAACTGGACACTATCTGTCTGACTGC GCTCTGGTGGCCGTGACGTC
Downstream 100 bases:
>100_bases ATATATTCATACGTTTGTTGCTGCTAGCAGCTGTTTTGTTGGGCAGTGGTTGCGCTAGCCTGTCGCATGCCCAGTTGGAT TATGCTGCGTCGGTCGCCGT
Product: YceI family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSAMVWISILFSVLPVSWATAQQRLTLDSVHSYFEFEVRTRLGQSIDGVFPRLEGEVVILPEGREKVRLHLYAGDALIPG RTHYTDWVRGEHFFDVQHYPTIEFESQPYSSRVILQGGKISGSLTIRGISRDETLQIQPAACARPGYDCDLVGTGVVLRE RYGIDGWRLILGNRVTFRWHGRLIEGPPSH
Sequences:
>Translated_190_residues MSAMVWISILFSVLPVSWATAQQRLTLDSVHSYFEFEVRTRLGQSIDGVFPRLEGEVVILPEGREKVRLHLYAGDALIPG RTHYTDWVRGEHFFDVQHYPTIEFESQPYSSRVILQGGKISGSLTIRGISRDETLQIQPAACARPGYDCDLVGTGVVLRE RYGIDGWRLILGNRVTFRWHGRLIEGPPSH >Mature_189_residues SAMVWISILFSVLPVSWATAQQRLTLDSVHSYFEFEVRTRLGQSIDGVFPRLEGEVVILPEGREKVRLHLYAGDALIPGR THYTDWVRGEHFFDVQHYPTIEFESQPYSSRVILQGGKISGSLTIRGISRDETLQIQPAACARPGYDCDLVGTGVVLRER YGIDGWRLILGNRVTFRWHGRLIEGPPSH
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21551; Mature: 21420
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMVWISILFSVLPVSWATAQQRLTLDSVHSYFEFEVRTRLGQSIDGVFPRLEGEVVIL CCHHHHHHHHHHHHCCCHHHHHHEEEHHHHHHHHEEEEHHHCCCCCCCCCCCCCCCEEEE PEGREKVRLHLYAGDALIPGRTHYTDWVRGEHFFDVQHYPTIEFESQPYSSRVILQGGKI ECCCCEEEEEEEECCEECCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEECCEE SGSLTIRGISRDETLQIQPAACARPGYDCDLVGTGVVLRERYGIDGWRLILGNRVTFRWH CCEEEEEECCCCCEEEECCHHHCCCCCCEEEEECCEEEEECCCCCEEEEEECCEEEEEEC GRLIEGPPSH CEEECCCCCC >Mature Secondary Structure SAMVWISILFSVLPVSWATAQQRLTLDSVHSYFEFEVRTRLGQSIDGVFPRLEGEVVIL CHHHHHHHHHHHHCCCHHHHHHEEEHHHHHHHHEEEEHHHCCCCCCCCCCCCCCCEEEE PEGREKVRLHLYAGDALIPGRTHYTDWVRGEHFFDVQHYPTIEFESQPYSSRVILQGGKI ECCCCEEEEEEEECCEECCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEECCEE SGSLTIRGISRDETLQIQPAACARPGYDCDLVGTGVVLRERYGIDGWRLILGNRVTFRWH CCEEEEEECCCCCEEEECCHHHCCCCCCEEEEECCEEEEECCCCCEEEEEECCEEEEEEC GRLIEGPPSH CEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA