Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680930
Identifier: 182680930
GI number: 182680930
Start: 460820
End: 461080
Strand: Reverse
Name: 182680930
Synonym: XfasM23_0368
Alternate gene names: NA
Gene position: 461080-460820 (Counterclockwise)
Preceding gene: 182680931
Following gene: 182680929
Centisome position: 18.18
GC content: 61.3
Gene sequence:
>261_bases ATGCCGACGACGACAAACACCCTCAAAATCAGCGCTGCGGTGGTAATCCAAGGCCTGATTTACCGCCCTGGCACAATCGT CCAGATCCCTACGGCACTGGCGCACGATTTAATGCGCCGTGGCCGTGCTGAGCTTGCCGGTGATGCCGATGGCCCCGTGG CAGTGATCATCGACCCACCCAGCGGCGGAGCACCCACACCAAACACCTTGACCCCTACAGAAACCAACGAGAAACCTGCC CCCCGCGGGAGTCGCCGTTGA
Upstream 100 bases:
>100_bases GCGGCACCCGGATTGTCGTGTTCCAAGATGTCGACTTTAACATCCGTCGTACCGAAAGCTTCTGCTACGGCGCAGCCGCC TGACCCTTGAGGAACACACC
Downstream 100 bases:
>100_bases TGCACCACCCCTCCTGGGATGACCTAGACGCCTTCCTAGAAACCGATGATTTTGCCGTGACAGCCCAATTACACTCGGAG AAAACGGGGCGCGTCCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MPTTTNTLKISAAVVIQGLIYRPGTIVQIPTALAHDLMRRGRAELAGDADGPVAVIIDPPSGGAPTPNTLTPTETNEKPA PRGSRR
Sequences:
>Translated_86_residues MPTTTNTLKISAAVVIQGLIYRPGTIVQIPTALAHDLMRRGRAELAGDADGPVAVIIDPPSGGAPTPNTLTPTETNEKPA PRGSRR >Mature_85_residues PTTTNTLKISAAVVIQGLIYRPGTIVQIPTALAHDLMRRGRAELAGDADGPVAVIIDPPSGGAPTPNTLTPTETNEKPAP RGSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8952; Mature: 8821
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTTNTLKISAAVVIQGLIYRPGTIVQIPTALAHDLMRRGRAELAGDADGPVAVIIDPP CCCCCCEEEEHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEECC SGGAPTPNTLTPTETNEKPAPRGSRR CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PTTTNTLKISAAVVIQGLIYRPGTIVQIPTALAHDLMRRGRAELAGDADGPVAVIIDPP CCCCCEEEEHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEECC SGGAPTPNTLTPTETNEKPAPRGSRR CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA