Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680931
Identifier: 182680931
GI number: 182680931
Start: 461098
End: 462972
Strand: Reverse
Name: 182680931
Synonym: XfasM23_0369
Alternate gene names: NA
Gene position: 462972-461098 (Counterclockwise)
Preceding gene: 182680932
Following gene: 182680930
Centisome position: 18.26
GC content: 58.88
Gene sequence:
>1875_bases ATGACCACAGCCACTGAGGTAGTACGGGACCTTCGCAAAGGCGGCACCCAGTACCGCCATGCCGATGTCCTATCCATAGA CGCACCCGCCCGAACCCTTGAACTTGCATTTAGCAGCGAAGCAGCAGAAGTGCAAACAAGGAGCGGCGTGGAGATTCTCG GCCACCGTATCAACGAAGTACGCATGCACCGTCTTGACAACGGTGCCGCCTTACTCCTGGACCACAACCCACGCGAACAC ATTGGCGTTGTCGAATCGGCCTCTATTGACAGCGACCACCGCGGACGCGCCATCGTGCGCTTCGGGCGCAGCCCACGTGC TGAAGAAATCCTACGTGATGTCCTGGACGGCATCCGTAAACACGTCTCAGTGGGCTATTTAGTCCATCAAGTCGAAGTGA TCGGCCAACGCGACGCAGGCCCCCTATACCGCGCCACGGACTGGGAGCCCATTGAAATCTCCATTGTCAGCATCCCTGCC GACCCCTCCGTCGGCATCGGGCGCGCCTTGGAAAATCTGCCACAGGACACCGCAACAGTCTCGCAACACACTCCAAGCAC CCCTGAGGATCAAACCATGACGGAACCATCACCCCCCGCCCATGCCGACACCACCAACACACCCCAGCCGACATCCAACG CGACTGACACCCCCAACAGCGTCGATGCCGAACGAACCCGTGTCAGACACATTGCTGACCTTGGCAAAACCTACGGACAC CTGGAACTGGCGCACGACTACATTACCCAAGGCCACTCACCGGAAGCATTCCAGCGCGCCCTACTGACAAAACTGACGGA CAAAGCCCCCATGCCCCAGTCTGAACCTCACACGGAAACCGGCATCGGCCTGTCCACACAAGAAATACGGCACTACAGCA TCGTCCGCGCAGTCCGCGCGTTATTGCCTAATGCCAGCCAGACCGACCGCAACGCGGCGGCCTTTGAGATTGCCTGTTCC GCTGCCGCAGAAAAAACCTACGGCAAACAGGCGCGCGGCCTACTGATCCCCTCGGACGTCCTCAACCGCGCATTCTCCAC CACCACCCCGACGGACGGCCCCGGCAGCAACATCATTGCCACCGAACTACACGCCTCCTCCTTTATCGAAATCCTGCGTA ATAAAACCTGGGTCATGCAGCGCGCTACCGTCATGGGCGGCCTGGTTGGCAACGTCGATATCCCCAGACAGAAAGGCACC ACCCAAGCCTACTGGGTGGGGGAGGGCGACTCACCGGAAAAAAGCAAACCTGCCCTGGACCAAATCCACTTCACCCCCAA ATCCCTGGCCGCCTATACCGACATCACCCGGCGTCTGCTCCTGCAATCCACCCCGGATGCCGAACAAATCGTCCGCAGCG ACCTACTGAACGTCATGGCCCTGGAAGTGGACCGTGCCGCCATCTACGGCAGCGGCTCAGACATGCAACCCACAGGCGTT AAACATCACAGCGGCATTAACGCCGTGTCCTTTGCACAAAAAGGGCAACCCACATTTGCTGAACTTGTCCAGATGGAAAC GCAAATTGCCCTGAACAACGCAGATGTGAACGCCATGTCCTACGCCTTCAATGCAGGCATACGTGGCTATGCCAAAACCG CCTTGAAGTTTCCCCAGACTGCCGCCAGCGGCACGATTTGGGAATCCGGCAACACCGTCAACGGCTACCCAGCCAGCGTG TCCAACCAGATCAAGGCCGGTGATGTCTTCTTTGGGAACTGGGCGGACCTCATCATTGCCATGTGGGGAGGCTTAGATAT CACCGTCGACCCCTACAGCCTCAGCACCAGCGGCGGCACCCGGATTGTCGTGTTCCAAGATGTCGACTTTAACATCCGTC GTACCGAAAGCTTCTGCTACGGCGCAGCCGCCTGA
Upstream 100 bases:
>100_bases AAGCCTCCGGCATCCCCAACGACTACCTCAAGTACCTGCTGTATGGCGCAGACCTCACTACCGCCAACACCACACCGACC CAGAAGGAACCCACCCCACC
Downstream 100 bases:
>100_bases CCCTTGAGGAACACACCATGCCGACGACGACAAACACCCTCAAAATCAGCGCTGCGGTGGTAATCCAAGGCCTGATTTAC CGCCCTGGCACAATCGTCCA
Product: peptidase U35 phage prohead HK97
Products: NA
Alternate protein names: Phage Capsid Protein; Phage-Related Protein; Capsid Protein HK; Peptidase U; U35 Family Peptidase; Phage Terminase GpA; U35 Peptidase Phage Protease Prohead HK; Phage Protease; Peptidase S
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MTTATEVVRDLRKGGTQYRHADVLSIDAPARTLELAFSSEAAEVQTRSGVEILGHRINEVRMHRLDNGAALLLDHNPREH IGVVESASIDSDHRGRAIVRFGRSPRAEEILRDVLDGIRKHVSVGYLVHQVEVIGQRDAGPLYRATDWEPIEISIVSIPA DPSVGIGRALENLPQDTATVSQHTPSTPEDQTMTEPSPPAHADTTNTPQPTSNATDTPNSVDAERTRVRHIADLGKTYGH LELAHDYITQGHSPEAFQRALLTKLTDKAPMPQSEPHTETGIGLSTQEIRHYSIVRAVRALLPNASQTDRNAAAFEIACS AAAEKTYGKQARGLLIPSDVLNRAFSTTTPTDGPGSNIIATELHASSFIEILRNKTWVMQRATVMGGLVGNVDIPRQKGT TQAYWVGEGDSPEKSKPALDQIHFTPKSLAAYTDITRRLLLQSTPDAEQIVRSDLLNVMALEVDRAAIYGSGSDMQPTGV KHHSGINAVSFAQKGQPTFAELVQMETQIALNNADVNAMSYAFNAGIRGYAKTALKFPQTAASGTIWESGNTVNGYPASV SNQIKAGDVFFGNWADLIIAMWGGLDITVDPYSLSTSGGTRIVVFQDVDFNIRRTESFCYGAAA
Sequences:
>Translated_624_residues MTTATEVVRDLRKGGTQYRHADVLSIDAPARTLELAFSSEAAEVQTRSGVEILGHRINEVRMHRLDNGAALLLDHNPREH IGVVESASIDSDHRGRAIVRFGRSPRAEEILRDVLDGIRKHVSVGYLVHQVEVIGQRDAGPLYRATDWEPIEISIVSIPA DPSVGIGRALENLPQDTATVSQHTPSTPEDQTMTEPSPPAHADTTNTPQPTSNATDTPNSVDAERTRVRHIADLGKTYGH LELAHDYITQGHSPEAFQRALLTKLTDKAPMPQSEPHTETGIGLSTQEIRHYSIVRAVRALLPNASQTDRNAAAFEIACS AAAEKTYGKQARGLLIPSDVLNRAFSTTTPTDGPGSNIIATELHASSFIEILRNKTWVMQRATVMGGLVGNVDIPRQKGT TQAYWVGEGDSPEKSKPALDQIHFTPKSLAAYTDITRRLLLQSTPDAEQIVRSDLLNVMALEVDRAAIYGSGSDMQPTGV KHHSGINAVSFAQKGQPTFAELVQMETQIALNNADVNAMSYAFNAGIRGYAKTALKFPQTAASGTIWESGNTVNGYPASV SNQIKAGDVFFGNWADLIIAMWGGLDITVDPYSLSTSGGTRIVVFQDVDFNIRRTESFCYGAAA >Mature_623_residues TTATEVVRDLRKGGTQYRHADVLSIDAPARTLELAFSSEAAEVQTRSGVEILGHRINEVRMHRLDNGAALLLDHNPREHI GVVESASIDSDHRGRAIVRFGRSPRAEEILRDVLDGIRKHVSVGYLVHQVEVIGQRDAGPLYRATDWEPIEISIVSIPAD PSVGIGRALENLPQDTATVSQHTPSTPEDQTMTEPSPPAHADTTNTPQPTSNATDTPNSVDAERTRVRHIADLGKTYGHL ELAHDYITQGHSPEAFQRALLTKLTDKAPMPQSEPHTETGIGLSTQEIRHYSIVRAVRALLPNASQTDRNAAAFEIACSA AAEKTYGKQARGLLIPSDVLNRAFSTTTPTDGPGSNIIATELHASSFIEILRNKTWVMQRATVMGGLVGNVDIPRQKGTT QAYWVGEGDSPEKSKPALDQIHFTPKSLAAYTDITRRLLLQSTPDAEQIVRSDLLNVMALEVDRAAIYGSGSDMQPTGVK HHSGINAVSFAQKGQPTFAELVQMETQIALNNADVNAMSYAFNAGIRGYAKTALKFPQTAASGTIWESGNTVNGYPASVS NQIKAGDVFFGNWADLIIAMWGGLDITVDPYSLSTSGGTRIVVFQDVDFNIRRTESFCYGAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67639; Mature: 67508
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTATEVVRDLRKGGTQYRHADVLSIDAPARTLELAFSSEAAEVQTRSGVEILGHRINEV CCCHHHHHHHHHHCCCCEECCEEEEECCCCCEEEEEECCCHHHHHHHCCHHHHHHHHHHH RMHRLDNGAALLLDHNPREHIGVVESASIDSDHRGRAIVRFGRSPRAEEILRDVLDGIRK HHHCCCCCCEEEEECCCHHHCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH HVSVGYLVHQVEVIGQRDAGPLYRATDWEPIEISIVSIPADPSVGIGRALENLPQDTATV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCHHHH SQHTPSTPEDQTMTEPSPPAHADTTNTPQPTSNATDTPNSVDAERTRVRHIADLGKTYGH HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH LELAHDYITQGHSPEAFQRALLTKLTDKAPMPQSEPHTETGIGLSTQEIRHYSIVRAVRA HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LLPNASQTDRNAAAFEIACSAAAEKTYGKQARGLLIPSDVLNRAFSTTTPTDGPGSNIIA HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEE TELHASSFIEILRNKTWVMQRATVMGGLVGNVDIPRQKGTTQAYWVGEGDSPEKSKPALD EHHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHH QIHFTPKSLAAYTDITRRLLLQSTPDAEQIVRSDLLNVMALEVDRAAIYGSGSDMQPTGV HEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCEEEECCCCCCCCCCC KHHSGINAVSFAQKGQPTFAELVQMETQIALNNADVNAMSYAFNAGIRGYAKTALKFPQT CCCCCCCHHHHHHCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCC AASGTIWESGNTVNGYPASVSNQIKAGDVFFGNWADLIIAMWGGLDITVDPYSLSTSGGT CCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCEEEECCCEEECCCCE RIVVFQDVDFNIRRTESFCYGAAA EEEEEECCCCCEEECCCCCCCCCC >Mature Secondary Structure TTATEVVRDLRKGGTQYRHADVLSIDAPARTLELAFSSEAAEVQTRSGVEILGHRINEV CCHHHHHHHHHHCCCCEECCEEEEECCCCCEEEEEECCCHHHHHHHCCHHHHHHHHHHH RMHRLDNGAALLLDHNPREHIGVVESASIDSDHRGRAIVRFGRSPRAEEILRDVLDGIRK HHHCCCCCCEEEEECCCHHHCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH HVSVGYLVHQVEVIGQRDAGPLYRATDWEPIEISIVSIPADPSVGIGRALENLPQDTATV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCHHHH SQHTPSTPEDQTMTEPSPPAHADTTNTPQPTSNATDTPNSVDAERTRVRHIADLGKTYGH HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH LELAHDYITQGHSPEAFQRALLTKLTDKAPMPQSEPHTETGIGLSTQEIRHYSIVRAVRA HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LLPNASQTDRNAAAFEIACSAAAEKTYGKQARGLLIPSDVLNRAFSTTTPTDGPGSNIIA HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEE TELHASSFIEILRNKTWVMQRATVMGGLVGNVDIPRQKGTTQAYWVGEGDSPEKSKPALD EHHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHH QIHFTPKSLAAYTDITRRLLLQSTPDAEQIVRSDLLNVMALEVDRAAIYGSGSDMQPTGV HEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCEEEECCCCCCCCCCC KHHSGINAVSFAQKGQPTFAELVQMETQIALNNADVNAMSYAFNAGIRGYAKTALKFPQT CCCCCCCHHHHHHCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCC AASGTIWESGNTVNGYPASVSNQIKAGDVFFGNWADLIIAMWGGLDITVDPYSLSTSGGT CCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCEEEECCCEEECCCCE RIVVFQDVDFNIRRTESFCYGAAA EEEEEECCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA