Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680919
Identifier: 182680919
GI number: 182680919
Start: 455468
End: 455977
Strand: Reverse
Name: 182680919
Synonym: XfasM23_0357
Alternate gene names: NA
Gene position: 455977-455468 (Counterclockwise)
Preceding gene: 182680920
Following gene: 182680918
Centisome position: 17.98
GC content: 59.8
Gene sequence:
>510_bases ATGCGCACCCTGGAGCAAGTGATGGCACGCATGGCTGACATCCCGATCCCATTCAAACAACTATGGGACCCGCACACCTG CCCCGAGCCATTACTCCCCTGGCTGGCCTGGTCATTGTCCGTGGACACCTGGCGCAGCACGTGGCCCGTGCATATCAAAC GCGCGCGTATTGCAGCAGCCATCGAGATTCAGCGTTGCAAAGGCAGCGTTAAAAGTGTGCGCGATGTGGTGCGCAGCTTT GGCGGAGACGTCCTCATCACCGAATGGTGGCAACAAAACCCACCGGCTGCACCGCACACCTTCACACTGCTGCTCACCTT ATCCGGGCAAGGCGGCAGCCAGAGCACCGCCGAATTTGTCGCAGATGTCATTACAGAAGTCATCCGCACCAAACCCGTTC GCAGCCATTTCACCTTTACCCAGGGCGTGCACACCATCGGACAGATTGGCCTGCTGGGTGGCGCACAGATCACCGCGTAC CGACGCCTACACCTCACCCAGGCCGCATGA
Upstream 100 bases:
>100_bases CGTACCCAGGCGGCCCGCTGCACCAACATCACCGTCGTGCATGGTGGCGTGGATGAATGAACCCCTGCACAGCCTGCTTC CCCCCACGGCAACACCGCTC
Downstream 100 bases:
>100_bases GGATGTTATGACCCCACTCCAAATCACCATCACCCCCCAGGGCCGCGCCGCCCTAGTGAACGCCCAACATCATGGCACCG TCCCCGTGCGGCTGGCCTCT
Product: phage tail protein I
Products: NA
Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Tail Protein I Prophage; Tail Formation-Like Protein; Phage P2 Baseplate Assembly GpI-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPI; Prophage Tail Protein; Bacteriophage Protein; Bacteriophage Tail Protein I
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MRTLEQVMARMADIPIPFKQLWDPHTCPEPLLPWLAWSLSVDTWRSTWPVHIKRARIAAAIEIQRCKGSVKSVRDVVRSF GGDVLITEWWQQNPPAAPHTFTLLLTLSGQGGSQSTAEFVADVITEVIRTKPVRSHFTFTQGVHTIGQIGLLGGAQITAY RRLHLTQAA
Sequences:
>Translated_169_residues MRTLEQVMARMADIPIPFKQLWDPHTCPEPLLPWLAWSLSVDTWRSTWPVHIKRARIAAAIEIQRCKGSVKSVRDVVRSF GGDVLITEWWQQNPPAAPHTFTLLLTLSGQGGSQSTAEFVADVITEVIRTKPVRSHFTFTQGVHTIGQIGLLGGAQITAY RRLHLTQAA >Mature_169_residues MRTLEQVMARMADIPIPFKQLWDPHTCPEPLLPWLAWSLSVDTWRSTWPVHIKRARIAAAIEIQRCKGSVKSVRDVVRSF GGDVLITEWWQQNPPAAPHTFTLLLTLSGQGGSQSTAEFVADVITEVIRTKPVRSHFTFTQGVHTIGQIGLLGGAQITAY RRLHLTQAA
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18889; Mature: 18889
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLEQVMARMADIPIPFKQLWDPHTCPEPLLPWLAWSLSVDTWRSTWPVHIKRARIAAA CCHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHH IEIQRCKGSVKSVRDVVRSFGGDVLITEWWQQNPPAAPHTFTLLLTLSGQGGSQSTAEFV HHHHHHCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHH ADVITEVIRTKPVRSHFTFTQGVHTIGQIGLLGGAQITAYRRLHLTQAA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRTLEQVMARMADIPIPFKQLWDPHTCPEPLLPWLAWSLSVDTWRSTWPVHIKRARIAAA CCHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHH IEIQRCKGSVKSVRDVVRSFGGDVLITEWWQQNPPAAPHTFTLLLTLSGQGGSQSTAEFV HHHHHHCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHH ADVITEVIRTKPVRSHFTFTQGVHTIGQIGLLGGAQITAYRRLHLTQAA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA