Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is proB
Identifier: 182680853
GI number: 182680853
Start: 374057
End: 375211
Strand: Direct
Name: proB
Synonym: XfasM23_0290
Alternate gene names: 182680853
Gene position: 374057-375211 (Clockwise)
Preceding gene: 182680852
Following gene: 182680854
Centisome position: 14.75
GC content: 62.77
Gene sequence:
>1155_bases ATGACCGGCATCCCTCCCCCCTCCCGCTTCCCCGAACAACCCATCCCCCCGTGGCGCCGCGCCGTCCTCAAAGTGGGTAG CAGCCTCCTCGCCGCCGATGGCGGCGGCCTTTCCCCCCGCTTTGCCTTGGACTTAGCACACTTCGTCTCCGCCAACATCA CCGCCGGACGCCAACTCGTCATCGTCTCCTCTGGCGCTGTCGCCGCTGGTCGTGCCCTGATACCCCCACTGCCCGAATCC GGCGGCGCTCTCGCCGCCCGCCAAGCCTTAGCTGCCCTTGGACAAGCACAACTCATCGCACTGTGGCAACGCTTCTTCGA CCGCCCCGTTGCCCAGGTCCTCCTGACCCACGACGACCTCCGCAACCGCCGTCGCTACCTCAACGCACGTGCCACATTGC GTGAACTACTGCACCTGGGCACCTTGCCTGTCGTCAACGAAAACGACACCGTCTCCGTCGATGAACTCAAACTAGGCGAC AACGACAACCTGGCAGCCATTGTTGCCGCACTGATTGATGCCCAAGCCCTGTTTATCGCCACCGATATTGACGGCTTATA CACCACCGACCCACGCCACCATTCTGACGCACAGCCCCTGCATGAAGTCCGCACCCTGACCCCTGAAAACCTTGCCATGG CTGGTGACAGCAGCAGCACCGTTGGCACCGGCGGTATGCGTACCAAACTTGAAGCAGCACTTAAAGCCGGCGCCGCTGGC ATTGACACCTACCTATTTAACGGCCGCAGCAGCGACGTTGTCCGCGGACTCGCACAACACCGCCTCCGCGGCACCCGCAT CCATCCCACCTGTACCCCGATTGCCGCCCGTAAATATTGGTTGCGTCACGCCCCAGTGGAGCCCGGCGCGATCCTCATCG ATGCCGGTGCCGCCGCTGCCTTGGCACAACAAGGCGCTTCCCTACTTCCGGGCGGCGTTTTGAGTGCCGAAGGCGACTTC CGCCGCGGCGATATGATCCAGATAGCCACCCGCAGCCCAGATCACCCCTCCCACCCCCTGGCACGCGGACTTGTCCAATA CTCAGCCGCCGATGTCCGCCGCATTGCCGGTTGCCATTCCCGCGATATTCAAACCCTCCTTGGATACACCTATGGCGACA CAATCGTTCACCGTGATGACCTCGTCCTCCTCTGA
Upstream 100 bases:
>100_bases CCATCACCCCCCCCCACACACACCAACCCATCCCCTCCCTGACCCCCCACAGCAACTGCCCATGCCTCCCATCTATCCCT GCAACTGACCCCGTCTCCCC
Downstream 100 bases:
>100_bases CCGCCCCCCACTCTTGCAACCATCACCACCATCAAATAAATAGCGAACCGCAACTGACCTCCCGATAGCCAGCCCCCCAT ACCATTGCACCCCCTGCCTA
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTGIPPPSRFPEQPIPPWRRAVLKVGSSLLAADGGGLSPRFALDLAHFVSANITAGRQLVIVSSGAVAAGRALIPPLPES GGALAARQALAALGQAQLIALWQRFFDRPVAQVLLTHDDLRNRRRYLNARATLRELLHLGTLPVVNENDTVSVDELKLGD NDNLAAIVAALIDAQALFIATDIDGLYTTDPRHHSDAQPLHEVRTLTPENLAMAGDSSSTVGTGGMRTKLEAALKAGAAG IDTYLFNGRSSDVVRGLAQHRLRGTRIHPTCTPIAARKYWLRHAPVEPGAILIDAGAAAALAQQGASLLPGGVLSAEGDF RRGDMIQIATRSPDHPSHPLARGLVQYSAADVRRIAGCHSRDIQTLLGYTYGDTIVHRDDLVLL
Sequences:
>Translated_384_residues MTGIPPPSRFPEQPIPPWRRAVLKVGSSLLAADGGGLSPRFALDLAHFVSANITAGRQLVIVSSGAVAAGRALIPPLPES GGALAARQALAALGQAQLIALWQRFFDRPVAQVLLTHDDLRNRRRYLNARATLRELLHLGTLPVVNENDTVSVDELKLGD NDNLAAIVAALIDAQALFIATDIDGLYTTDPRHHSDAQPLHEVRTLTPENLAMAGDSSSTVGTGGMRTKLEAALKAGAAG IDTYLFNGRSSDVVRGLAQHRLRGTRIHPTCTPIAARKYWLRHAPVEPGAILIDAGAAAALAQQGASLLPGGVLSAEGDF RRGDMIQIATRSPDHPSHPLARGLVQYSAADVRRIAGCHSRDIQTLLGYTYGDTIVHRDDLVLL >Mature_383_residues TGIPPPSRFPEQPIPPWRRAVLKVGSSLLAADGGGLSPRFALDLAHFVSANITAGRQLVIVSSGAVAAGRALIPPLPESG GALAARQALAALGQAQLIALWQRFFDRPVAQVLLTHDDLRNRRRYLNARATLRELLHLGTLPVVNENDTVSVDELKLGDN DNLAAIVAALIDAQALFIATDIDGLYTTDPRHHSDAQPLHEVRTLTPENLAMAGDSSSTVGTGGMRTKLEAALKAGAAGI DTYLFNGRSSDVVRGLAQHRLRGTRIHPTCTPIAARKYWLRHAPVEPGAILIDAGAAAALAQQGASLLPGGVLSAEGDFR RGDMIQIATRSPDHPSHPLARGLVQYSAADVRRIAGCHSRDIQTLLGYTYGDTIVHRDDLVLL
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain
Homologues:
Organism=Homo sapiens, GI21361368, Length=263, Percent_Identity=29.6577946768061, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI62912457, Length=261, Percent_Identity=29.8850574712644, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1786437, Length=366, Percent_Identity=42.896174863388, Blast_Score=265, Evalue=5e-72, Organism=Caenorhabditis elegans, GI17569967, Length=255, Percent_Identity=34.9019607843137, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17569969, Length=255, Percent_Identity=34.9019607843137, Blast_Score=124, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6320506, Length=418, Percent_Identity=34.9282296650718, Blast_Score=215, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6321822, Length=416, Percent_Identity=33.8942307692308, Blast_Score=196, Evalue=7e-51, Organism=Drosophila melanogaster, GI21357643, Length=281, Percent_Identity=31.6725978647687, Blast_Score=105, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROB_XYLF2 (B2I7L1)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001829013.1 - ProteinModelPortal: B2I7L1 - SMR: B2I7L1 - GeneID: 6203961 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_0290 - HOGENOM: HBG507643 - OMA: TFGDNDM - ProtClustDB: PRK05429 - GO: GO:0005737 - HAMAP: MF_00456 - InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000729 - PRINTS: PR00474 - SMART: SM00359 - TIGRFAMs: TIGR01027
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA; SSF53633 Aa_kinase; SSF88697 PUA-like
EC number: =2.7.2.11
Molecular weight: Translated: 40872; Mature: 40741
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS00902 GLUTAMATE_5_KINASE; PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIPPPSRFPEQPIPPWRRAVLKVGSSLLAADGGGLSPRFALDLAHFVSANITAGRQLV CCCCCCCCCCCCCCCCHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHCCCCCCCEEE IVSSGAVAAGRALIPPLPESGGALAARQALAALGQAQLIALWQRFFDRPVAQVLLTHDDL EEECCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHH RNRRRYLNARATLRELLHLGTLPVVNENDTVSVDELKLGDNDNLAAIVAALIDAQALFIA HHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEHEEEEECCCCCHHHHHHHHHCCCEEEEE TDIDGLYTTDPRHHSDAQPLHEVRTLTPENLAMAGDSSSTVGTGGMRTKLEAALKAGAAG ECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCC IDTYLFNGRSSDVVRGLAQHRLRGTRIHPTCTPIAARKYWLRHAPVEPGAILIDAGAAAA CHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHH LAQQGASLLPGGVLSAEGDFRRGDMIQIATRSPDHPSHPLARGLVQYSAADVRRIAGCHS HHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC RDIQTLLGYTYGDTIVHRDDLVLL HHHHHHHCCCCCCEEEECCCEEEC >Mature Secondary Structure TGIPPPSRFPEQPIPPWRRAVLKVGSSLLAADGGGLSPRFALDLAHFVSANITAGRQLV CCCCCCCCCCCCCCCHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHCCCCCCCEEE IVSSGAVAAGRALIPPLPESGGALAARQALAALGQAQLIALWQRFFDRPVAQVLLTHDDL EEECCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHH RNRRRYLNARATLRELLHLGTLPVVNENDTVSVDELKLGDNDNLAAIVAALIDAQALFIA HHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEHEEEEECCCCCHHHHHHHHHCCCEEEEE TDIDGLYTTDPRHHSDAQPLHEVRTLTPENLAMAGDSSSTVGTGGMRTKLEAALKAGAAG ECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCC IDTYLFNGRSSDVVRGLAQHRLRGTRIHPTCTPIAARKYWLRHAPVEPGAILIDAGAAAA CHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHH LAQQGASLLPGGVLSAEGDFRRGDMIQIATRSPDHPSHPLARGLVQYSAADVRRIAGCHS HHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC RDIQTLLGYTYGDTIVHRDDLVLL HHHHHHHCCCCCCEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA