Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is argE [H]
Identifier: 182680849
GI number: 182680849
Start: 369118
End: 370212
Strand: Direct
Name: argE [H]
Synonym: XfasM23_0286
Alternate gene names: 182680849
Gene position: 369118-370212 (Clockwise)
Preceding gene: 182680848
Following gene: 182680850
Centisome position: 14.56
GC content: 60.37
Gene sequence:
>1095_bases ATGAGCGCGTTGCTCGACTCCACCCTGGATCACCTTGAGCAACTGGTATCCTTCGATACCCGCAACCCCCCCCGTTCCAT CACGACCGACGGCATTTTCTCCTATGTGAAAGCCCACCTCCCGGGCTTCCAGATTGAAATGACCGATCATGGCGCCGGTG CCGTCAGCCTCTATGCAGTGCGCGGCACCCCCAACGTCCTATTCAACGTCCACCTAGATACCGTCCCCGACTCCCCCGCA TGGAGCGCTGACCCACATGTGATGCGCCGTGCCGTGGATCGCGTCATCGGATTAGGTGTCTGCGACATCAAAGGCGCTGC CGCCGCCCTATTGGCCGCCGTCCAAGCCACTGATGGCCCCGCTGCCCTCCTATTCACCTCTGACGAAGAAGCCAACGACC CGCGCGGCGTTGCCGCCTTCCTAAAACGCAATATCCCGTATCACGCCGTCTTAGTGGCCGAACCGACCATGAGTCAAGCT GTGCTAGCCCATCGTGGCATCAGCGCCGTCCTGATGAAATTCACCGGCCGCGCCGGTCATGCCTCCGCCGAACAACAACC CCAGGCCAGTGCCCTCCACCAAGCGATGCGCTGGGGCGTCCGTGCCCTTGATTACACCGCATCATTGGCACATACCCGCT TCGGCGGACTGACCGGACTGCGTTTCAACATCGGACGCCTCGAAGGAGGCATCAAAGCCAACATCATCGCACCGACCGCC GAACTACGCTTTGGCCTCCGCCCCCTCCCATCAATGGATGTGGATCAACTCCTGGCCGCATTGGCCGCATTGGCCGTACC GGCGCCCGCCTCCTTTGAAGAAACATTCCGCGGCCCAAGCTTACCCTGGGGTGGCATTGCTACTGCCGAAATCCGTCGCC TCTCCGCCCGTGATATCGCGGATGCATTGCACTTGCCGATTGGTAACGCCGTGGACTTTTGGACAGAAGCCTCACTCTTT TCCGCCTGCGGCTACACTGCTCTCGTTTACGGACCGGGCGACATTGCCCAAGCCCACACCGCAGATGAATTCGTCACCCT CCAACAATTGCAACGCTACGCCGAATCCGTTTACCGCATCATCAATGCCACCTAA
Upstream 100 bases:
>100_bases GCTCATGTAAATCGTTCCCTGCGCTCATGACCGTCATTGTCTTTTCAAACCACGCCCTCCCACTGCGCCCATTGCCACAC ATCATGATGAAGGTTGACGC
Downstream 100 bases:
>100_bases CCTCCGGCATCGCTAATTATTTGGTCCTCCCGGGCGCGTCCGTCCCCCAACCACCGCCAATCCAATGCACGCCAACCTAC AGACTCGACAGATCATCATC
Product: acetylornithine deacetylase
Products: NA
Alternate protein names: AO; Acetylornithinase; N-acetylornithinase; NAO [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSALLDSTLDHLEQLVSFDTRNPPRSITTDGIFSYVKAHLPGFQIEMTDHGAGAVSLYAVRGTPNVLFNVHLDTVPDSPA WSADPHVMRRAVDRVIGLGVCDIKGAAAALLAAVQATDGPAALLFTSDEEANDPRGVAAFLKRNIPYHAVLVAEPTMSQA VLAHRGISAVLMKFTGRAGHASAEQQPQASALHQAMRWGVRALDYTASLAHTRFGGLTGLRFNIGRLEGGIKANIIAPTA ELRFGLRPLPSMDVDQLLAALAALAVPAPASFEETFRGPSLPWGGIATAEIRRLSARDIADALHLPIGNAVDFWTEASLF SACGYTALVYGPGDIAQAHTADEFVTLQQLQRYAESVYRIINAT
Sequences:
>Translated_364_residues MSALLDSTLDHLEQLVSFDTRNPPRSITTDGIFSYVKAHLPGFQIEMTDHGAGAVSLYAVRGTPNVLFNVHLDTVPDSPA WSADPHVMRRAVDRVIGLGVCDIKGAAAALLAAVQATDGPAALLFTSDEEANDPRGVAAFLKRNIPYHAVLVAEPTMSQA VLAHRGISAVLMKFTGRAGHASAEQQPQASALHQAMRWGVRALDYTASLAHTRFGGLTGLRFNIGRLEGGIKANIIAPTA ELRFGLRPLPSMDVDQLLAALAALAVPAPASFEETFRGPSLPWGGIATAEIRRLSARDIADALHLPIGNAVDFWTEASLF SACGYTALVYGPGDIAQAHTADEFVTLQQLQRYAESVYRIINAT >Mature_363_residues SALLDSTLDHLEQLVSFDTRNPPRSITTDGIFSYVKAHLPGFQIEMTDHGAGAVSLYAVRGTPNVLFNVHLDTVPDSPAW SADPHVMRRAVDRVIGLGVCDIKGAAAALLAAVQATDGPAALLFTSDEEANDPRGVAAFLKRNIPYHAVLVAEPTMSQAV LAHRGISAVLMKFTGRAGHASAEQQPQASALHQAMRWGVRALDYTASLAHTRFGGLTGLRFNIGRLEGGIKANIIAPTAE LRFGLRPLPSMDVDQLLAALAALAVPAPASFEETFRGPSLPWGGIATAEIRRLSARDIADALHLPIGNAVDFWTEASLFS ACGYTALVYGPGDIAQAHTADEFVTLQQLQRYAESVYRIINAT
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family. ArgE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790395, Length=315, Percent_Identity=27.6190476190476, Blast_Score=95, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010169 - InterPro: IPR001261 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.16 [H]
Molecular weight: Translated: 38839; Mature: 38707
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALLDSTLDHLEQLVSFDTRNPPRSITTDGIFSYVKAHLPGFQIEMTDHGAGAVSLYAV CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEE RGTPNVLFNVHLDTVPDSPAWSADPHVMRRAVDRVIGLGVCDIKGAAAALLAAVQATDGP ECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC AALLFTSDEEANDPRGVAAFLKRNIPYHAVLVAEPTMSQAVLAHRGISAVLMKFTGRAGH EEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCC ASAEQQPQASALHQAMRWGVRALDYTASLAHTRFGGLTGLRFNIGRLEGGIKANIIAPTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCEEEEECCHH ELRFGLRPLPSMDVDQLLAALAALAVPAPASFEETFRGPSLPWGGIATAEIRRLSARDIA HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH DALHLPIGNAVDFWTEASLFSACGYTALVYGPGDIAQAHTADEFVTLQQLQRYAESVYRI HHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHH INAT HCCC >Mature Secondary Structure SALLDSTLDHLEQLVSFDTRNPPRSITTDGIFSYVKAHLPGFQIEMTDHGAGAVSLYAV CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEE RGTPNVLFNVHLDTVPDSPAWSADPHVMRRAVDRVIGLGVCDIKGAAAALLAAVQATDGP ECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC AALLFTSDEEANDPRGVAAFLKRNIPYHAVLVAEPTMSQAVLAHRGISAVLMKFTGRAGH EEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCC ASAEQQPQASALHQAMRWGVRALDYTASLAHTRFGGLTGLRFNIGRLEGGIKANIIAPTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCEEEEECCHH ELRFGLRPLPSMDVDQLLAALAALAVPAPASFEETFRGPSLPWGGIATAEIRRLSARDIA HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH DALHLPIGNAVDFWTEASLFSACGYTALVYGPGDIAQAHTADEFVTLQQLQRYAESVYRI HHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHH INAT HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10692366 [H]