Click here to switch to the map view.

The map label for this gene is ynhA [C]

Identifier: 182680843

GI number: 182680843

Start: 363777

End: 364217

Strand: Reverse

Name: ynhA [C]

Synonym: XfasM23_0280

Alternate gene names: 182680843

Gene position: 364217-363777 (Counterclockwise)

Preceding gene: 182680844

Following gene: 182680842

Centisome position: 14.36

GC content: 52.83

Gene sequence:

>441_bases
ATGACCGATGATCCATTTCCACTGGAATCCACCGCGGCAGCGGCGCAAGCAGCCATTGCCGAGGAATTTTCCTTCTTCGG
CAACTGGTCGGAACGCTATCAGTATCTGATCGACTTGGGACGCAAGCTCCCAGTATTTCCCGAGAGTTGGAAAACGGAGG
AGCACCGTCTGCACGGCTGCCAGTCCATGGTCTGGATTGTGTCTGAAGGCAATAGCGATGATCTCAAGTTCTATGGTGCC
AGTGATTCAGCCATTGTCTCCGGTCTGATCTATCTAGCGTTGCGCGTTTACTCCGGACGCAGTGCCGCCGAAATACTAAA
GACTTCCCCCAGTTACATCACCGATATCGGCCTCGCCAAACACCTGTCGCCAACACGTAATAATGGTTTGGCAGCAATGC
TCGACTTGATTCGCAATACAGCGCAAGCACTTACCGCATGA

Upstream 100 bases:

>100_bases
GAAGCAGCACACGTAAAGGTGTGGATCTGACTATCTACGGCAATCACGCTGATACACTCGCCCTACCGTCACCGTACACG
GAGTCATCCTGTTCAAGACC

Downstream 100 bases:

>100_bases
GCACATCCCCTTCCTCCAACGCAACGCTGCGCACGCTGCTATGCCGTCCTGGTTTCACGGCGGTGCTGGCCTATCGCATC
GCTGCAACGCTGTCTCACCA

Product: Fe-S metabolism associated SufE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTDDPFPLESTAAAAQAAIAEEFSFFGNWSERYQYLIDLGRKLPVFPESWKTEEHRLHGCQSMVWIVSEGNSDDLKFYGA
SDSAIVSGLIYLALRVYSGRSAAEILKTSPSYITDIGLAKHLSPTRNNGLAAMLDLIRNTAQALTA

Sequences:

>Translated_146_residues
MTDDPFPLESTAAAAQAAIAEEFSFFGNWSERYQYLIDLGRKLPVFPESWKTEEHRLHGCQSMVWIVSEGNSDDLKFYGA
SDSAIVSGLIYLALRVYSGRSAAEILKTSPSYITDIGLAKHLSPTRNNGLAAMLDLIRNTAQALTA
>Mature_145_residues
TDDPFPLESTAAAAQAAIAEEFSFFGNWSERYQYLIDLGRKLPVFPESWKTEEHRLHGCQSMVWIVSEGNSDDLKFYGAS
DSAIVSGLIYLALRVYSGRSAAEILKTSPSYITDIGLAKHLSPTRNNGLAAMLDLIRNTAQALTA

Specific function: Unknown

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family [H]

Homologues:

Organism=Escherichia coli, GI1787969, Length=113, Percent_Identity=35.3982300884956, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI1789176, Length=142, Percent_Identity=31.6901408450704, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003808 [H]

Pfam domain/function: PF02657 SufE [H]

EC number: NA

Molecular weight: Translated: 16062; Mature: 15931

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDPFPLESTAAAAQAAIAEEFSFFGNWSERYQYLIDLGRKLPVFPESWKTEEHRLHGC
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
QSMVWIVSEGNSDDLKFYGASDSAIVSGLIYLALRVYSGRSAAEILKTSPSYITDIGLAK
HHEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH
HLSPTRNNGLAAMLDLIRNTAQALTA
HCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDDPFPLESTAAAAQAAIAEEFSFFGNWSERYQYLIDLGRKLPVFPESWKTEEHRLHGC
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
QSMVWIVSEGNSDDLKFYGASDSAIVSGLIYLALRVYSGRSAAEILKTSPSYITDIGLAK
HHEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH
HLSPTRNNGLAAMLDLIRNTAQALTA
HCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7756693; 11481430 [H]