Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is adk
Identifier: 182680781
GI number: 182680781
Start: 283967
End: 284530
Strand: Direct
Name: adk
Synonym: XfasM23_0210
Alternate gene names: 182680781
Gene position: 283967-284530 (Clockwise)
Preceding gene: 182680777
Following gene: 182680782
Centisome position: 11.2
GC content: 53.9
Gene sequence:
>564_bases ATGCGATTGGTTCTATTGGGACCACCTGGTTCAGGTAAAGGCACTCAGGCGGCGCAAATGCAGGAAACATTACAGATTCC GCATATTTCCACTGGTGACCTGTTGCGCAGTGAAGTGGTTGCTGGGACTCCTCTTGGCCTACAGGCCAAGCAAGTCATGG CACAAGGTGATTTGGTTTCCGATGCGATTTTGCTTGGCATGCTTGAGTCACGTTTGAGCCATACGGATGTAGTAAAAGGC TTCATCCTTGATGGCTATCCGCGCAATCTGTCTCAGGCCGCTGCGCTGGATGGGTTGTTAGCCAAGTTCGGGCATCCTTT AAATGCTGTGGTGCAGCTTGAGGTACCCACCGATGTGTTGGTGGAACGTATTGCTGGCCGTGCTCAGGCGGAAGGCCGTG AGGATGACACTCCTGATGCGGTGCGTAAGCGTTTGCAGGTCTATAACGATTCAACCGCGCCGGTCATCGGTTTCTATCAG CAGCGCGGCATCTTGTTGCGCGTGGATGGTGTGGGACGTTTGGATGAGGTTTCCCAGCGTATTGCGGTTGCGCTGGGTTG CTGA
Upstream 100 bases:
>100_bases CTTGGATGCGTTAAGCTGCGCGGCATCATGGTGCGGTGTAGGCAGAGGGTCGAAGTGTAACCCCGCTTGCCGTTGTTTTT TTTCTATATGGAGTGAATTA
Downstream 100 bases:
>100_bases AGTCGGTTCACGTGACTTTAGGATGTTGGAGAAGAGGTGCGGTATCAATGACGCTCTGACATGATGCCACTTGGGTTCAG AGGTCCTCTTTACTTATCTG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRLVLLGPPGSGKGTQAAQMQETLQIPHISTGDLLRSEVVAGTPLGLQAKQVMAQGDLVSDAILLGMLESRLSHTDVVKG FILDGYPRNLSQAAALDGLLAKFGHPLNAVVQLEVPTDVLVERIAGRAQAEGREDDTPDAVRKRLQVYNDSTAPVIGFYQ QRGILLRVDGVGRLDEVSQRIAVALGC
Sequences:
>Translated_187_residues MRLVLLGPPGSGKGTQAAQMQETLQIPHISTGDLLRSEVVAGTPLGLQAKQVMAQGDLVSDAILLGMLESRLSHTDVVKG FILDGYPRNLSQAAALDGLLAKFGHPLNAVVQLEVPTDVLVERIAGRAQAEGREDDTPDAVRKRLQVYNDSTAPVIGFYQ QRGILLRVDGVGRLDEVSQRIAVALGC >Mature_187_residues MRLVLLGPPGSGKGTQAAQMQETLQIPHISTGDLLRSEVVAGTPLGLQAKQVMAQGDLVSDAILLGMLESRLSHTDVVKG FILDGYPRNLSQAAALDGLLAKFGHPLNAVVQLEVPTDVLVERIAGRAQAEGREDDTPDAVRKRLQVYNDSTAPVIGFYQ QRGILLRVDGVGRLDEVSQRIAVALGC
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI4502013, Length=213, Percent_Identity=35.6807511737089, Blast_Score=135, Evalue=3e-32, Organism=Homo sapiens, GI7524346, Length=213, Percent_Identity=35.6807511737089, Blast_Score=134, Evalue=3e-32, Organism=Homo sapiens, GI4502011, Length=184, Percent_Identity=34.7826086956522, Blast_Score=128, Evalue=3e-30, Organism=Homo sapiens, GI19923437, Length=198, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=6e-26, Organism=Homo sapiens, GI310110345, Length=198, Percent_Identity=32.8282828282828, Blast_Score=104, Evalue=5e-23, Organism=Homo sapiens, GI53832003, Length=198, Percent_Identity=32.8282828282828, Blast_Score=104, Evalue=5e-23, Organism=Homo sapiens, GI8051579, Length=198, Percent_Identity=32.8282828282828, Blast_Score=104, Evalue=5e-23, Organism=Homo sapiens, GI53832001, Length=198, Percent_Identity=32.8282828282828, Blast_Score=104, Evalue=5e-23, Organism=Homo sapiens, GI28144899, Length=184, Percent_Identity=30.4347826086957, Blast_Score=102, Evalue=1e-22, Organism=Homo sapiens, GI28144897, Length=184, Percent_Identity=30.4347826086957, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI7706497, Length=180, Percent_Identity=28.8888888888889, Blast_Score=94, Evalue=6e-20, Organism=Homo sapiens, GI22749187, Length=127, Percent_Identity=36.2204724409449, Blast_Score=74, Evalue=6e-14, Organism=Escherichia coli, GI1786680, Length=218, Percent_Identity=36.697247706422, Blast_Score=135, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17552384, Length=208, Percent_Identity=35.5769230769231, Blast_Score=134, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17567503, Length=177, Percent_Identity=36.7231638418079, Blast_Score=124, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17550688, Length=182, Percent_Identity=34.6153846153846, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17533833, Length=172, Percent_Identity=35.4651162790698, Blast_Score=107, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17537943, Length=199, Percent_Identity=29.6482412060301, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6320432, Length=197, Percent_Identity=42.1319796954315, Blast_Score=155, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6321018, Length=195, Percent_Identity=33.8461538461538, Blast_Score=107, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6322828, Length=173, Percent_Identity=32.3699421965318, Blast_Score=104, Evalue=7e-24, Organism=Drosophila melanogaster, GI22026816, Length=205, Percent_Identity=38.5365853658537, Blast_Score=146, Evalue=8e-36, Organism=Drosophila melanogaster, GI17737899, Length=197, Percent_Identity=35.0253807106599, Blast_Score=120, Evalue=6e-28, Organism=Drosophila melanogaster, GI24645822, Length=197, Percent_Identity=35.0253807106599, Blast_Score=120, Evalue=6e-28, Organism=Drosophila melanogaster, GI24663208, Length=188, Percent_Identity=33.5106382978723, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI17647141, Length=188, Percent_Identity=33.5106382978723, Blast_Score=111, Evalue=3e-25, Organism=Drosophila melanogaster, GI221459597, Length=191, Percent_Identity=32.4607329842932, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI21356893, Length=191, Percent_Identity=32.4607329842932, Blast_Score=100, Evalue=4e-22,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_XYLF2 (B2I757)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001828941.1 - ProteinModelPortal: B2I757 - SMR: B2I757 - GeneID: 6204096 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_0210 - HOGENOM: HBG630208 - OMA: EINQPLE - ProtClustDB: PRK00279 - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK
EC number: =2.7.4.3
Molecular weight: Translated: 19943; Mature: 19943
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVLLGPPGSGKGTQAAQMQETLQIPHISTGDLLRSEVVAGTPLGLQAKQVMAQGDLVS CEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHH DAILLGMLESRLSHTDVVKGFILDGYPRNLSQAAALDGLLAKFGHPLNAVVQLEVPTDVL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH VERIAGRAQAEGREDDTPDAVRKRLQVYNDSTAPVIGFYQQRGILLRVDGVGRLDEVSQR HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHCCEEEEECCCCCHHHHHHH IAVALGC HHHHCCC >Mature Secondary Structure MRLVLLGPPGSGKGTQAAQMQETLQIPHISTGDLLRSEVVAGTPLGLQAKQVMAQGDLVS CEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHH DAILLGMLESRLSHTDVVKGFILDGYPRNLSQAAALDGLLAKFGHPLNAVVQLEVPTDVL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH VERIAGRAQAEGREDDTPDAVRKRLQVYNDSTAPVIGFYQQRGILLRVDGVGRLDEVSQR HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHCCEEEEECCCCCHHHHHHH IAVALGC HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA