Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680773
Identifier: 182680773
GI number: 182680773
Start: 272326
End: 272634
Strand: Reverse
Name: 182680773
Synonym: XfasM23_0202
Alternate gene names: NA
Gene position: 272634-272326 (Counterclockwise)
Preceding gene: 182680778
Following gene: 182680771
Centisome position: 10.75
GC content: 55.34
Gene sequence:
>309_bases ATGCGTGAATTGACATTGACCGAAATTGACAACGTATCCGGTGCCGATCTCGGTTCGCGGCTTAACGCAGCTATCGTAGG TGGCGTTGCTGCTTTTTTTGCTGGCTCCATCTGGGGTGGAACCCGTGGTGGTGATGGCGGCGGCATTTTAGGTGTCGGAA CAATCGGCCAAGGCGTGGGCATGGTCTATGGCGGTATTGTTGGTGCCGTCGGCGGCGCCATAGCCGGCTTCGTCCTCGAC CAGAGTGTCACATACTCCTACACTAGTGGGTTTATGGCCTCTCTCTTTAACGGCACCTTCGCTAAGTAA
Upstream 100 bases:
>100_bases TTCGCAATAATTGATCATCGGTATCTCGAACACAATCTCTAACTTTCATATCGAGAATGTTCGAGATGTTCTTCTAATAA CCTTGGAGCAAAGAGAAATT
Downstream 100 bases:
>100_bases TCTGCTTAAGCCGCAGACTAGGCAGCTGGATATATTCCAGCTGCCTAGCCCTTTTGGTAACCCTTGTTGCACATATTAAT AGAAATACACCACCCGCCTA
Product: high-affinity branched-chain amino acid ABC transporter membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MRELTLTEIDNVSGADLGSRLNAAIVGGVAAFFAGSIWGGTRGGDGGGILGVGTIGQGVGMVYGGIVGAVGGAIAGFVLD QSVTYSYTSGFMASLFNGTFAK
Sequences:
>Translated_102_residues MRELTLTEIDNVSGADLGSRLNAAIVGGVAAFFAGSIWGGTRGGDGGGILGVGTIGQGVGMVYGGIVGAVGGAIAGFVLD QSVTYSYTSGFMASLFNGTFAK >Mature_102_residues MRELTLTEIDNVSGADLGSRLNAAIVGGVAAFFAGSIWGGTRGGDGGGILGVGTIGQGVGMVYGGIVGAVGGAIAGFVLD QSVTYSYTSGFMASLFNGTFAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9985; Mature: 9985
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELTLTEIDNVSGADLGSRLNAAIVGGVAAFFAGSIWGGTRGGDGGGILGVGTIGQGVG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHH MVYGGIVGAVGGAIAGFVLDQSVTYSYTSGFMASLFNGTFAK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRELTLTEIDNVSGADLGSRLNAAIVGGVAAFFAGSIWGGTRGGDGGGILGVGTIGQGVG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHH MVYGGIVGAVGGAIAGFVLDQSVTYSYTSGFMASLFNGTFAK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA