Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is ybhG [C]
Identifier: 182680759
GI number: 182680759
Start: 257043
End: 258152
Strand: Reverse
Name: ybhG [C]
Synonym: XfasM23_0188
Alternate gene names: 182680759
Gene position: 258152-257043 (Counterclockwise)
Preceding gene: 182680760
Following gene: 182680758
Centisome position: 10.18
GC content: 57.03
Gene sequence:
>1110_bases GTGAAAAACAATATCCTGACTCTGTCGATGTGCATCACACTTGGTGTCATCACTTTAAGCAGTTGCGGCAGCGACACATC ACCGCAAACAACGCCGCTGCGCACGGTAAAACTCGAGACGGCTGGAGCTGAAAATCTCGCCAAGACCCAGTTTGTAGCCA GCGTGCGTCAGGAACAACGCGCAGATCTAGCCTTCGAAAACGGCGGGCGGATTGCCGCAATCAACGTCGATGTTGGCGAC AAAGTGCGCCATGAACAAGTGCTGGCCCGCCTGGACAGGGAGCCAGTGCGGCTAAAACTGCAACAAGCAGAAGCCACTTT ACGTGCTGCCACCGCACAGTTGCACGAACGCCAGACTCAGCTGAATCAGCAGCAAGCGATGTTTAAAGAAGCGATGGTTT CTCAGGCTGCGCTCACCAGCGCACAAGTCGCATTAGACGCTGCGCAAGCCGATCTGCACGTAGCCGAGTCCAATCACGCA TTAGCTAAACGCGCACTGCGCCAAAGCGAACTGCGTGCACCATTCGATGGAAGTGTCGTCGCACGTCTCTTGCAACCACA GGCTGATACTGCACCAGGTCAAACGGTGTTGCAGATCGAAGGACGGGGGCGTCTACAAGCAGTAGCCACCCTGCCAGCCG AGATTGCCCAGGCACTGAGTCCAGACAAGGTGATCCAGGGAAATCGCACCGATACACCGCAAGCAAGCATCTCACTGCGC CTGCGCAGTGTGTCTCCACGCTTGGAAAGCGGTGCCAGCCTGCAAGCAATCTTCGATGTGACAGAGACAACGACTCCGCT GCACAGTGGCGACACGCTGTTATTGGCACTGTCTGCCACCGCAACGCCGGCACTGTCGGTGCAGCTGCCCGCAGTGATAC CGGGCTTGAACGGCAACAGTGGAATCGTGTTTGTCTATCAACCTAAAACCGGGGTGGTGTTACGCCGCGATGTCACACTC GGAATGATCGAAGGTGAGCGGATGCAGATCCGCTCCGGACTCAAGCCCGGAGAACAGGTTGTGGTTGCCGGGGCAGCGTT CCTCAGCGACGGTCAAAAAGTGCTGCCGTTCCGTTCCAGCTCGCGTTTGAGTACTGGAGACAGCCGATGA
Upstream 100 bases:
>100_bases GCAGCCGAATCCCAGTGCAACCACAGCAACGTTGTCATCGCTGCTTGACTCACTACATACCTTAAATGAATGGGTCGGCA TCACCGACCGGAGATACTTT
Downstream 100 bases:
>100_bases AGATTACGCACGTAGCAATGAGTGCCAACCGGCTGACTCTATTCACCGCAGTGTTGCTACTGATCGCCGGTATCGCCACC TTTCTCAACTTCCCCTCGCA
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; RND Efflux Membrane Fusion Protein; Membrane-Fusion Protein; HlyD Family Secretion Protein; RND Family Mulitdrug Efflux Protein; Protein Secretion Protein; AcrA/E Family Efflux Transporter MFP Subunit; Acriflavin Resistance Periplasmic Protein; Membrane Fusion Protein; Lipoprotein; AbgT Transporter; Auxiliary Transport Protein MFP Family; Acriflavin Resistance Protein E; Transport/Efflux Transmembrane Protein; Efflux Transporter Component; RND Membrane Fusion Protein; Multidrug RND Transporter Membrane Fusion Protein; Secretion Protein; Cation/Multidrug Efflux System Mebrane-Fusion Component; Efflux Transmembrane Protein; Multidrug Efflux Protein; RND/Acr Family Transmembrane Transporter
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MKNNILTLSMCITLGVITLSSCGSDTSPQTTPLRTVKLETAGAENLAKTQFVASVRQEQRADLAFENGGRIAAINVDVGD KVRHEQVLARLDREPVRLKLQQAEATLRAATAQLHERQTQLNQQQAMFKEAMVSQAALTSAQVALDAAQADLHVAESNHA LAKRALRQSELRAPFDGSVVARLLQPQADTAPGQTVLQIEGRGRLQAVATLPAEIAQALSPDKVIQGNRTDTPQASISLR LRSVSPRLESGASLQAIFDVTETTTPLHSGDTLLLALSATATPALSVQLPAVIPGLNGNSGIVFVYQPKTGVVLRRDVTL GMIEGERMQIRSGLKPGEQVVVAGAAFLSDGQKVLPFRSSSRLSTGDSR
Sequences:
>Translated_369_residues MKNNILTLSMCITLGVITLSSCGSDTSPQTTPLRTVKLETAGAENLAKTQFVASVRQEQRADLAFENGGRIAAINVDVGD KVRHEQVLARLDREPVRLKLQQAEATLRAATAQLHERQTQLNQQQAMFKEAMVSQAALTSAQVALDAAQADLHVAESNHA LAKRALRQSELRAPFDGSVVARLLQPQADTAPGQTVLQIEGRGRLQAVATLPAEIAQALSPDKVIQGNRTDTPQASISLR LRSVSPRLESGASLQAIFDVTETTTPLHSGDTLLLALSATATPALSVQLPAVIPGLNGNSGIVFVYQPKTGVVLRRDVTL GMIEGERMQIRSGLKPGEQVVVAGAAFLSDGQKVLPFRSSSRLSTGDSR >Mature_369_residues MKNNILTLSMCITLGVITLSSCGSDTSPQTTPLRTVKLETAGAENLAKTQFVASVRQEQRADLAFENGGRIAAINVDVGD KVRHEQVLARLDREPVRLKLQQAEATLRAATAQLHERQTQLNQQQAMFKEAMVSQAALTSAQVALDAAQADLHVAESNHA LAKRALRQSELRAPFDGSVVARLLQPQADTAPGQTVLQIEGRGRLQAVATLPAEIAQALSPDKVIQGNRTDTPQASISLR LRSVSPRLESGASLQAIFDVTETTTPLHSGDTLLLALSATATPALSVQLPAVIPGLNGNSGIVFVYQPKTGVVLRRDVTL GMIEGERMQIRSGLKPGEQVVVAGAAFLSDGQKVLPFRSSSRLSTGDSR
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Membrane-associated. Inner membrane [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39311; Mature: 39311
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNILTLSMCITLGVITLSSCGSDTSPQTTPLRTVKLETAGAENLAKTQFVASVRQEQR CCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH ADLAFENGGRIAAINVDVGDKVRHEQVLARLDREPVRLKLQQAEATLRAATAQLHERQTQ CCCEEECCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH LNQQQAMFKEAMVSQAALTSAQVALDAAQADLHVAESNHALAKRALRQSELRAPFDGSVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCCCHHHH ARLLQPQADTAPGQTVLQIEGRGRLQAVATLPAEIAQALSPDKVIQGNRTDTPQASISLR HHHHCCCCCCCCCCEEEEECCCCCEEEEECCHHHHHHHCCCCCEECCCCCCCCCCEEEEE LRSVSPRLESGASLQAIFDVTETTTPLHSGDTLLLALSATATPALSVQLPAVIPGLNGNS EEECCCCHHCCCCEEEEEEEHHCCCCCCCCCEEEEEEECCCCCEEEEECCEEECCCCCCC GIVFVYQPKTGVVLRRDVTLGMIEGERMQIRSGLKPGEQVVVAGAAFLSDGQKVLPFRSS CEEEEEECCCCEEEEECCEEEEECCCHHHHHCCCCCCCEEEEEEHHHHCCCCEEECCCCC SRLSTGDSR CCCCCCCCC >Mature Secondary Structure MKNNILTLSMCITLGVITLSSCGSDTSPQTTPLRTVKLETAGAENLAKTQFVASVRQEQR CCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH ADLAFENGGRIAAINVDVGDKVRHEQVLARLDREPVRLKLQQAEATLRAATAQLHERQTQ CCCEEECCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH LNQQQAMFKEAMVSQAALTSAQVALDAAQADLHVAESNHALAKRALRQSELRAPFDGSVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCCCHHHH ARLLQPQADTAPGQTVLQIEGRGRLQAVATLPAEIAQALSPDKVIQGNRTDTPQASISLR HHHHCCCCCCCCCCEEEEECCCCCEEEEECCHHHHHHHCCCCCEECCCCCCCCCCEEEEE LRSVSPRLESGASLQAIFDVTETTTPLHSGDTLLLALSATATPALSVQLPAVIPGLNGNS EEECCCCHHCCCCEEEEEEEHHCCCCCCCCCEEEEEEECCCCCEEEEECCEEECCCCCCC GIVFVYQPKTGVVLRRDVTLGMIEGERMQIRSGLKPGEQVVVAGAAFLSDGQKVLPFRSS CEEEEEECCCCEEEEECCEEEEECCCHHHHHCCCCCCCEEEEEEHHHHCCCCEEECCCCC SRLSTGDSR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA