Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680760
Identifier: 182680760
GI number: 182680760
Start: 259455
End: 259937
Strand: Reverse
Name: 182680760
Synonym: XfasM23_0189
Alternate gene names: NA
Gene position: 259937-259455 (Counterclockwise)
Preceding gene: 182680762
Following gene: 182680759
Centisome position: 10.25
GC content: 49.28
Gene sequence:
>483_bases ATGTCATCTCACGCAACTCTAAATAACCGTCACATTTATTCCGAATCGCCTGAGCGCAACTGGCCATACCGCGTGGAATA TTGCAAAAATCCGACCATCGCAGGGGCGCTAGACGGGAAACGACATGTGATGCTGCTGACCATCAATGAAATAAATGCCC CACCGAAACGTATGAACAATGCCCATGCCAGATGTCTTCTTCAATGTACGCGCAACCGACGGCAGCACAAGGGATTCAAC AACAATCACGGCCAACAACAACTGAAATCAACATCAAACCGCAAATCCAAACAACCGCTCCCCATCCAAGCTGTGCCAGC ATCCACCAACAAAGTCAGCCGCAACGGCTGCCATGCTCAAAAACCGCACTACTCCACTGGACACTCCGAAATTTTGGAAG CACATCGCTGTGCATCACACATGACCACATTAGATGTAACGCCGCCCTCTGCGTTCATTGCACATCAAATCCCGCATAAA TAA
Upstream 100 bases:
>100_bases AGAGCAAGACGCAGACATGGATTTGCAATTGCGCCGTGCGCACTTTGGAAGAGATCAGCATCTTGACTATTGTCCCTGAA ATTATCTTTTCACTGTGCCG
Downstream 100 bases:
>100_bases TGCATCAAGCACAGATGCAAGTGATCGGTCTCACACCCAACCCACTGCAGCAGTGCCTTCCAGTGATTGGTGTTGGCATC CTCCACATCACTGCAAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSSHATLNNRHIYSESPERNWPYRVEYCKNPTIAGALDGKRHVMLLTINEINAPPKRMNNAHARCLLQCTRNRRQHKGFN NNHGQQQLKSTSNRKSKQPLPIQAVPASTNKVSRNGCHAQKPHYSTGHSEILEAHRCASHMTTLDVTPPSAFIAHQIPHK
Sequences:
>Translated_160_residues MSSHATLNNRHIYSESPERNWPYRVEYCKNPTIAGALDGKRHVMLLTINEINAPPKRMNNAHARCLLQCTRNRRQHKGFN NNHGQQQLKSTSNRKSKQPLPIQAVPASTNKVSRNGCHAQKPHYSTGHSEILEAHRCASHMTTLDVTPPSAFIAHQIPHK >Mature_159_residues SSHATLNNRHIYSESPERNWPYRVEYCKNPTIAGALDGKRHVMLLTINEINAPPKRMNNAHARCLLQCTRNRRQHKGFNN NHGQQQLKSTSNRKSKQPLPIQAVPASTNKVSRNGCHAQKPHYSTGHSEILEAHRCASHMTTLDVTPPSAFIAHQIPHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18108; Mature: 17977
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHATLNNRHIYSESPERNWPYRVEYCKNPTIAGALDGKRHVMLLTINEINAPPKRMNN CCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEECCCCCCHHHHCC AHARCLLQCTRNRRQHKGFNNNHGQQQLKSTSNRKSKQPLPIQAVPASTNKVSRNGCHAQ HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCC KPHYSTGHSEILEAHRCASHMTTLDVTPPSAFIAHQIPHK CCCCCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHCCCCC >Mature Secondary Structure SSHATLNNRHIYSESPERNWPYRVEYCKNPTIAGALDGKRHVMLLTINEINAPPKRMNN CCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEECCCCCCHHHHCC AHARCLLQCTRNRRQHKGFNNNHGQQQLKSTSNRKSKQPLPIQAVPASTNKVSRNGCHAQ HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCC KPHYSTGHSEILEAHRCASHMTTLDVTPPSAFIAHQIPHK CCCCCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA