Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is qorB [H]
Identifier: 182680756
GI number: 182680756
Start: 251816
End: 252697
Strand: Direct
Name: qorB [H]
Synonym: XfasM23_0185
Alternate gene names: 182680756
Gene position: 251816-252697 (Clockwise)
Preceding gene: 182680754
Following gene: 182680761
Centisome position: 9.93
GC content: 50.79
Gene sequence:
>882_bases ATGACCCGAACTATTTCCCGCATCCTTGTGACTGGTACCAGCGGCCAACTTGGCGCTTTAGTGATAGAAGAATTGCTAAA AAAGATACATGCATCTCATTTAATCGCCGCGGCACGTGATCCAAAGGCATTAATGGCGTTTAGTAGACGTGGTGTTGAAA CACGCCTATTGGATTACACAGATCAGATCAGCATAGAGGCTGCCTTTCAGGGGGTCGAACGTCTCTTGCTGGTGTCCTCT AATGTCATTGATCAACGTTTGGTGCAACACCGCAACGTGATTGAAGCCGCGGCACGTGCTGGTGTTGGTTTGTTTGCTTA CACCAGCTTGTTACATGCCGATAACTCGTCATTGTTGCTGGCCAAGGATCACGTGCAAACCGAAGCGTTATTGAAAGGAT CGGGAATACCTTACGTCCTATTGCGTAATGGTTGGTATACCGAGAACTACACTGATTCTATAGGAGCAGCGTTGGTTCAT GGGGCCGTCCTTGGTAGTGCTGGTACAGGCCGCATTGCTGCGGCTACACGCGCCGATTATGCGGCTGCGGCTGCGGCTAT ATTGGCTTCTGATGTCGATCAAGCCGGACGTACCTATGAATTGGCTGGTGATGAGGCATTTACCATGCCAGAGTACGCTG CCGAGATTGCACAACAGTCTGGGAAGCCGGTGATTTACCGCGATTTACCCGAAGCTGAGTACGCTGCAATCTTGATGCAA GTAGGGTTGCCGGAGAGCTTTGCTGCAATTCTGGCACAGTCTGATATTGGTGCCTCCCAGGGCGCACTCTTCGATGACAG TCATCAACTTAGTACTCTTATCGGACGGCCGACTACTCCGCTACGTGAAGTGGTTGCCAAAGCACTTTCTGCAGTCCGCT AA
Upstream 100 bases:
>100_bases CCTAAAAAAATTACCTTGACTGTAAAAATTTCTTCTTGCGAAAAAATCATAGTCTCGACAATAAACGTGATATTTTGAAA TATCCTCTTAGCACTTTAGC
Downstream 100 bases:
>100_bases GCTACTTCTGTGTGTTCTTTGATTGCAGTGACTCAGTGACCCAAGGGTATGATTGATCACTGGATGTTCAAAATCAGTGT CGCTGGTGAAGTTGCTTGTC
Product: NmrA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTRTISRILVTGTSGQLGALVIEELLKKIHASHLIAAARDPKALMAFSRRGVETRLLDYTDQISIEAAFQGVERLLLVSS NVIDQRLVQHRNVIEAAARAGVGLFAYTSLLHADNSSLLLAKDHVQTEALLKGSGIPYVLLRNGWYTENYTDSIGAALVH GAVLGSAGTGRIAAATRADYAAAAAAILASDVDQAGRTYELAGDEAFTMPEYAAEIAQQSGKPVIYRDLPEAEYAAILMQ VGLPESFAAILAQSDIGASQGALFDDSHQLSTLIGRPTTPLREVVAKALSAVR
Sequences:
>Translated_293_residues MTRTISRILVTGTSGQLGALVIEELLKKIHASHLIAAARDPKALMAFSRRGVETRLLDYTDQISIEAAFQGVERLLLVSS NVIDQRLVQHRNVIEAAARAGVGLFAYTSLLHADNSSLLLAKDHVQTEALLKGSGIPYVLLRNGWYTENYTDSIGAALVH GAVLGSAGTGRIAAATRADYAAAAAAILASDVDQAGRTYELAGDEAFTMPEYAAEIAQQSGKPVIYRDLPEAEYAAILMQ VGLPESFAAILAQSDIGASQGALFDDSHQLSTLIGRPTTPLREVVAKALSAVR >Mature_292_residues TRTISRILVTGTSGQLGALVIEELLKKIHASHLIAAARDPKALMAFSRRGVETRLLDYTDQISIEAAFQGVERLLLVSSN VIDQRLVQHRNVIEAAARAGVGLFAYTSLLHADNSSLLLAKDHVQTEALLKGSGIPYVLLRNGWYTENYTDSIGAALVHG AVLGSAGTGRIAAATRADYAAAAAAILASDVDQAGRTYELAGDEAFTMPEYAAEIAQQSGKPVIYRDLPEAEYAAILMQV GLPESFAAILAQSDIGASQGALFDDSHQLSTLIGRPTTPLREVVAKALSAVR
Specific function: Quinone oxidoreductase that may play some additional role beyond quinone reduction. Potential redox sensor protein. Overexpression induces retardation of growth [H]
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NmrA-type oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1790656, Length=279, Percent_Identity=55.1971326164875, Blast_Score=278, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: =1.6.5.2 [H]
Molecular weight: Translated: 31111; Mature: 30980
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTISRILVTGTSGQLGALVIEELLKKIHASHLIAAARDPKALMAFSRRGVETRLLDYT CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCC DQISIEAAFQGVERLLLVSSNVIDQRLVQHRNVIEAAARAGVGLFAYTSLLHADNSSLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEE AKDHVQTEALLKGSGIPYVLLRNGWYTENYTDSIGAALVHGAVLGSAGTGRIAAATRADY EHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHH AAAAAAILASDVDQAGRTYELAGDEAFTMPEYAAEIAQQSGKPVIYRDLPEAEYAAILMQ HHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH VGLPESFAAILAQSDIGASQGALFDDSHQLSTLIGRPTTPLREVVAKALSAVR HCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TRTISRILVTGTSGQLGALVIEELLKKIHASHLIAAARDPKALMAFSRRGVETRLLDYT CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCC DQISIEAAFQGVERLLLVSSNVIDQRLVQHRNVIEAAARAGVGLFAYTSLLHADNSSLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEE AKDHVQTEALLKGSGIPYVLLRNGWYTENYTDSIGAALVHGAVLGSAGTGRIAAATRADY EHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHH AAAAAAILASDVDQAGRTYELAGDEAFTMPEYAAEIAQQSGKPVIYRDLPEAEYAAILMQ HHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH VGLPESFAAILAQSDIGASQGALFDDSHQLSTLIGRPTTPLREVVAKALSAVR HCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]