Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182680761
Identifier: 182680761
GI number: 182680761
Start: 259977
End: 260891
Strand: Direct
Name: 182680761
Synonym: XfasM23_0190
Alternate gene names: NA
Gene position: 259977-260891 (Clockwise)
Preceding gene: 182680756
Following gene: 182680763
Centisome position: 10.25
GC content: 54.54
Gene sequence:
>915_bases ATGCTGATCTCTTCCAAAGTGCGCACGGCGCAATTGCAAATCCATGTCTGCGTCTTGCTCTGGGGATTTACTGCGATCTT TGGCAGGTTGATTACTTTGGAAGCGTTGCCGCTGGTGTGGTGGCGGATGACAATGGTTGTTGTTTCATTGGTGTTGCTGC CGCGTGTGTGGCGTGGTCTACGTGCGCTGCATCCGCGTGTGATGCTTGCTTATGCTGGTATTGGTGCATTGGTGGCGTTG CACTGGTTGGCTTTTTATAGTGCGGTCAAATTGGCCAATGCTTCGGTGGCAGCAACCTGCATTGCATTGGCACCGGTGTT TACTGCGGTGGTGGAACCTTGTGTGGTGGGGCGGCCGTTCCGGGCACGTGAGCTGCTGTTGGGGCTGATGGTGCTGCCAG GCGTGGCGCTTGTGGTGGGTGGGGTCCCCGATGGCATGCGTATTGGTATTTTTATTGGTGTTGTGTCGGCGTTATTAGCT GCGTTATTCGGTTCGCTCAACAAACGTATGGTGGTGCACGCTGATCCGTTGACTGTCACTGCTTTGGAGCTGGGGTCTGG CATTTTGACACTGACAGGATTGATGCTGCTGTTGTCGCTGGTGTTTCCGACGTTGCATGAGATGCCGTGGCAGATACCCA GCGCGCATGACATTTTCCTGTTGCTCATATTGTCATTTGCGTGCACCCTGCTGCCGTTTGCGTTGTCGCTGGTCGCACTG CGTTATCTCAGTGCTTATTCGCTCCAGTTGGTGACTAATTTGGAGCCGGTCTACTCGATTGCACTGGCGATTGTGTTGCT CGGTGAGCAGCGCGAGCTGACAGGACTTTTTTATTTAGGCGTGGCAGTTGTTCTTGGCGTGGTCTTATTACATCCGATGT TGGAGCGGCGTGGTCGGGCGTCGTCCCCGCAGTAG
Upstream 100 bases:
>100_bases AGTTGCGCTCAGGCGATTCGGAATAAATGTGACGGTTATTTAGAGTTGCGTGAGATGACATCGGCACAGTGAAAAGATAA TTTCAGGGACAATAGTCAAG
Downstream 100 bases:
>100_bases CGGCATCGCTCAGCTCATCAACAGTAAAGAGGGGATGCAGTGATGTAGGTGTGTGTCATTAGGCACCGCGATCAGATCAT GCGTGTTTTTTCTGTTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MLISSKVRTAQLQIHVCVLLWGFTAIFGRLITLEALPLVWWRMTMVVVSLVLLPRVWRGLRALHPRVMLAYAGIGALVAL HWLAFYSAVKLANASVAATCIALAPVFTAVVEPCVVGRPFRARELLLGLMVLPGVALVVGGVPDGMRIGIFIGVVSALLA ALFGSLNKRMVVHADPLTVTALELGSGILTLTGLMLLLSLVFPTLHEMPWQIPSAHDIFLLLILSFACTLLPFALSLVAL RYLSAYSLQLVTNLEPVYSIALAIVLLGEQRELTGLFYLGVAVVLGVVLLHPMLERRGRASSPQ
Sequences:
>Translated_304_residues MLISSKVRTAQLQIHVCVLLWGFTAIFGRLITLEALPLVWWRMTMVVVSLVLLPRVWRGLRALHPRVMLAYAGIGALVAL HWLAFYSAVKLANASVAATCIALAPVFTAVVEPCVVGRPFRARELLLGLMVLPGVALVVGGVPDGMRIGIFIGVVSALLA ALFGSLNKRMVVHADPLTVTALELGSGILTLTGLMLLLSLVFPTLHEMPWQIPSAHDIFLLLILSFACTLLPFALSLVAL RYLSAYSLQLVTNLEPVYSIALAIVLLGEQRELTGLFYLGVAVVLGVVLLHPMLERRGRASSPQ >Mature_304_residues MLISSKVRTAQLQIHVCVLLWGFTAIFGRLITLEALPLVWWRMTMVVVSLVLLPRVWRGLRALHPRVMLAYAGIGALVAL HWLAFYSAVKLANASVAATCIALAPVFTAVVEPCVVGRPFRARELLLGLMVLPGVALVVGGVPDGMRIGIFIGVVSALLA ALFGSLNKRMVVHADPLTVTALELGSGILTLTGLMLLLSLVFPTLHEMPWQIPSAHDIFLLLILSFACTLLPFALSLVAL RYLSAYSLQLVTNLEPVYSIALAIVLLGEQRELTGLFYLGVAVVLGVVLLHPMLERRGRASSPQ
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32868; Mature: 32868
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISSKVRTAQLQIHVCVLLWGFTAIFGRLITLEALPLVWWRMTMVVVSLVLLPRVWRGL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALHPRVMLAYAGIGALVALHWLAFYSAVKLANASVAATCIALAPVFTAVVEPCVVGRPF HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC RARELLLGLMVLPGVALVVGGVPDGMRIGIFIGVVSALLAALFGSLNKRMVVHADPLTVT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEE ALELGSGILTLTGLMLLLSLVFPTLHEMPWQIPSAHDIFLLLILSFACTLLPFALSLVAL HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RYLSAYSLQLVTNLEPVYSIALAIVLLGEQRELTGLFYLGVAVVLGVVLLHPMLERRGRA HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SSPQ CCCC >Mature Secondary Structure MLISSKVRTAQLQIHVCVLLWGFTAIFGRLITLEALPLVWWRMTMVVVSLVLLPRVWRGL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALHPRVMLAYAGIGALVALHWLAFYSAVKLANASVAATCIALAPVFTAVVEPCVVGRPF HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC RARELLLGLMVLPGVALVVGGVPDGMRIGIFIGVVSALLAALFGSLNKRMVVHADPLTVT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEE ALELGSGILTLTGLMLLLSLVFPTLHEMPWQIPSAHDIFLLLILSFACTLLPFALSLVAL HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RYLSAYSLQLVTNLEPVYSIALAIVLLGEQRELTGLFYLGVAVVLGVVLLHPMLERRGRA HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SSPQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA