Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is trpE [H]
Identifier: 182680728
GI number: 182680728
Start: 216182
End: 217687
Strand: Direct
Name: trpE [H]
Synonym: XfasM23_0157
Alternate gene names: 182680728
Gene position: 216182-217687 (Clockwise)
Preceding gene: 182680727
Following gene: 182680729
Centisome position: 8.53
GC content: 50.86
Gene sequence:
>1506_bases ATGTTATCTGTGTCAGGAAGGAAAGTTGCTTTGATCACTGCAATGCAGTTTCAGCGTCAAGTTGCCGAAGGGTGTACCCG CATTCCAGTGGTGCGTGAAGTCCAGTCTGATTTGGATACTCCGCTTTCGATCTATTTAAAGTTTGCCGATGCTCCATATA CCTATTTGTTTGAGTCGGTGGAAGGTGGGGAGCATTTTGCGAGGTATTCGATCATTGGGTTGCCGGCACGCCGTGTCTAT ACCTTTCATGGGCATACCCTGGTGGTGAGTGAGTTCGGTAAGGTGTTGGAAACGCGTCAAGTCGCCGATCCGCTTGCCGA AGTTGAGCTGTTGCGTGCGCAGTATGTAGTGCCGCAATTAGAAGGGTTGCCAGGTTTTACAGGCGGCTTAGTGGGGTGGT TCGGCTTTGAATGTATCCAGTACATCGAACCTCGCTTCATGGGAGGTAAAAAACGTGATGAACTTGGTACGCCAGATATT CTGCTGATGCTTTCGGAAGAGTTTGCGGTGTTTGACAGCCTCAAGGGTCGATTATATTTGATCGTTCACGCGGATCCTGC TCAACCGCATTCTTACGTTCGTGCAATGAAACGTTTGGATGCGTTGATCCACCGTCTGCGGCAAGGTGGGATGGATTATC CGCATTCACATATTTCGGAAGTGATTAACGAGGAAGATTTTCACTCTTCTTTGACGCGTGAGCAGTATCACGCTGTGGTG CGTAAGGCGCAGGAGTATGTGCGTTCGGGTGATATTTTTCAGGTTGTACCAAGTCAGCGCCTGTGTACGCAGTTTCATGC ACGTCCGATTGATGTATATCGGGCGTTGCGCACGCTGAATCCGTCGCCTTATATGTATTTCATTGATATTGGTGCTACTC AGGTGGTTGGTTCATCACCGGAGATATTGGCGCGATTGCAGGGGGATGTGGTCACGGTGCGTCCTATTGCCGGCACACGC CCGCGAGGTGCGACTCCGGAGCATGACAAACGGTTGGAAATGGAGTTGTTAGCCGATCCAAAAGAGCGTGCTGAGCACGT GATGCTGATTGATTTGGGTCGCAATGATATCGGACGTGTTGTCGAGGCCGGGAGTGTACAAGTCAAGGAGTCGTTTGTAA TCGAGCGTTATAGTCATGTCATGCATATTGTCAGTGAGGTCACCGGTATCTTGAAGCCGGGTTTGAACTACGTTGATGTG TTACGTGCAACGTTCCCTGCGGGTACTGTGTCCGGAGCGCCAAAGATTCGTGCATTGGAGATTATCCGTGAGTTGGAACC AGTGTGTCGCAACGTATATTCCGGTGCAGTGGGTTACATTGGCTGGCATGGAGATGCTGATACTGCAATCGCGATTCGTA CTGCGGTGATTCAAAACGGTTGCTTGTACGTGCAGGCTGGCGGTGGTGTGGTGTATGACTCGGATCCAGATTTGGAGTGG CAGGAAACCATGAACAAGGCGCGTGCATTATTTAGGGCTGTGGCGCAGGCGGCCAGAGGGTTGTGA
Upstream 100 bases:
>100_bases TCGGTTCTGGTAAAGCGAGCCAGTTTTCACTTGATCAGTCTGTGTTTTTATATGACTTCTCATTTTTTATGGCGATGTTG ATCCGTTGCCGTTGTCTTCC
Downstream 100 bases:
>100_bases TGGAGAGTGTCAAAAGTGTATGGGGCCACCACAATAGTGGCAGTGACTACGGTCCATTCACGGATGCTGTTGGTGCTTCA TTCTTCCGTTATGCGTCTTC
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MLSVSGRKVALITAMQFQRQVAEGCTRIPVVREVQSDLDTPLSIYLKFADAPYTYLFESVEGGEHFARYSIIGLPARRVY TFHGHTLVVSEFGKVLETRQVADPLAEVELLRAQYVVPQLEGLPGFTGGLVGWFGFECIQYIEPRFMGGKKRDELGTPDI LLMLSEEFAVFDSLKGRLYLIVHADPAQPHSYVRAMKRLDALIHRLRQGGMDYPHSHISEVINEEDFHSSLTREQYHAVV RKAQEYVRSGDIFQVVPSQRLCTQFHARPIDVYRALRTLNPSPYMYFIDIGATQVVGSSPEILARLQGDVVTVRPIAGTR PRGATPEHDKRLEMELLADPKERAEHVMLIDLGRNDIGRVVEAGSVQVKESFVIERYSHVMHIVSEVTGILKPGLNYVDV LRATFPAGTVSGAPKIRALEIIRELEPVCRNVYSGAVGYIGWHGDADTAIAIRTAVIQNGCLYVQAGGGVVYDSDPDLEW QETMNKARALFRAVAQAARGL
Sequences:
>Translated_501_residues MLSVSGRKVALITAMQFQRQVAEGCTRIPVVREVQSDLDTPLSIYLKFADAPYTYLFESVEGGEHFARYSIIGLPARRVY TFHGHTLVVSEFGKVLETRQVADPLAEVELLRAQYVVPQLEGLPGFTGGLVGWFGFECIQYIEPRFMGGKKRDELGTPDI LLMLSEEFAVFDSLKGRLYLIVHADPAQPHSYVRAMKRLDALIHRLRQGGMDYPHSHISEVINEEDFHSSLTREQYHAVV RKAQEYVRSGDIFQVVPSQRLCTQFHARPIDVYRALRTLNPSPYMYFIDIGATQVVGSSPEILARLQGDVVTVRPIAGTR PRGATPEHDKRLEMELLADPKERAEHVMLIDLGRNDIGRVVEAGSVQVKESFVIERYSHVMHIVSEVTGILKPGLNYVDV LRATFPAGTVSGAPKIRALEIIRELEPVCRNVYSGAVGYIGWHGDADTAIAIRTAVIQNGCLYVQAGGGVVYDSDPDLEW QETMNKARALFRAVAQAARGL >Mature_501_residues MLSVSGRKVALITAMQFQRQVAEGCTRIPVVREVQSDLDTPLSIYLKFADAPYTYLFESVEGGEHFARYSIIGLPARRVY TFHGHTLVVSEFGKVLETRQVADPLAEVELLRAQYVVPQLEGLPGFTGGLVGWFGFECIQYIEPRFMGGKKRDELGTPDI LLMLSEEFAVFDSLKGRLYLIVHADPAQPHSYVRAMKRLDALIHRLRQGGMDYPHSHISEVINEEDFHSSLTREQYHAVV RKAQEYVRSGDIFQVVPSQRLCTQFHARPIDVYRALRTLNPSPYMYFIDIGATQVVGSSPEILARLQGDVVTVRPIAGTR PRGATPEHDKRLEMELLADPKERAEHVMLIDLGRNDIGRVVEAGSVQVKESFVIERYSHVMHIVSEVTGILKPGLNYVDV LRATFPAGTVSGAPKIRALEIIRELEPVCRNVYSGAVGYIGWHGDADTAIAIRTAVIQNGCLYVQAGGGVVYDSDPDLEW QETMNKARALFRAVAQAARGL
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=404, Percent_Identity=38.3663366336634, Blast_Score=240, Evalue=1e-64, Organism=Escherichia coli, GI1788114, Length=454, Percent_Identity=32.3788546255507, Blast_Score=240, Evalue=2e-64, Organism=Escherichia coli, GI87082077, Length=278, Percent_Identity=26.978417266187, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1786809, Length=205, Percent_Identity=28.2926829268293, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320935, Length=494, Percent_Identity=37.0445344129555, Blast_Score=308, Evalue=9e-85, Organism=Saccharomyces cerevisiae, GI6324361, Length=492, Percent_Identity=26.6260162601626, Blast_Score=124, Evalue=2e-29,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 55890; Mature: 55890
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVSGRKVALITAMQFQRQVAEGCTRIPVVREVQSDLDTPLSIYLKFADAPYTYLFESV CCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHC EGGEHFARYSIIGLPARRVYTFHGHTLVVSEFGKVLETRQVADPLAEVELLRAQYVVPQL CCCCHHHHEEEEECCHHEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGLPGFTGGLVGWFGFECIQYIEPRFMGGKKRDELGTPDILLMLSEEFAVFDSLKGRLYL CCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEECHHHHHHHCCCCEEEE IVHADPAQPHSYVRAMKRLDALIHRLRQGGMDYPHSHISEVINEEDFHSSLTREQYHAVV EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHH RKAQEYVRSGDIFQVVPSQRLCTQFHARPIDVYRALRTLNPSPYMYFIDIGATQVVGSSP HHHHHHHHCCCEEEECCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCH EILARLQGDVVTVRPIAGTRPRGATPEHDKRLEMELLADPKERAEHVMLIDLGRNDIGRV HHHHHHCCCEEEEEECCCCCCCCCCCCCHHCCHHHHHCCCHHHCCEEEEEECCCCHHHHH VEAGSVQVKESFVIERYSHVMHIVSEVTGILKPGLNYVDVLRATFPAGTVSGAPKIRALE HHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHH IIRELEPVCRNVYSGAVGYIGWHGDADTAIAIRTAVIQNGCLYVQAGGGVVYDSDPDLEW HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCEEEECCCCCCCH QETMNKARALFRAVAQAARGL HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSVSGRKVALITAMQFQRQVAEGCTRIPVVREVQSDLDTPLSIYLKFADAPYTYLFESV CCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHC EGGEHFARYSIIGLPARRVYTFHGHTLVVSEFGKVLETRQVADPLAEVELLRAQYVVPQL CCCCHHHHEEEEECCHHEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGLPGFTGGLVGWFGFECIQYIEPRFMGGKKRDELGTPDILLMLSEEFAVFDSLKGRLYL CCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEECHHHHHHHCCCCEEEE IVHADPAQPHSYVRAMKRLDALIHRLRQGGMDYPHSHISEVINEEDFHSSLTREQYHAVV EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHH RKAQEYVRSGDIFQVVPSQRLCTQFHARPIDVYRALRTLNPSPYMYFIDIGATQVVGSSP HHHHHHHHCCCEEEECCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCH EILARLQGDVVTVRPIAGTRPRGATPEHDKRLEMELLADPKERAEHVMLIDLGRNDIGRV HHHHHHCCCEEEEEECCCCCCCCCCCCCHHCCHHHHHCCCHHHCCEEEEEECCCCHHHHH VEAGSVQVKESFVIERYSHVMHIVSEVTGILKPGLNYVDVLRATFPAGTVSGAPKIRALE HHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHH IIRELEPVCRNVYSGAVGYIGWHGDADTAIAIRTAVIQNGCLYVQAGGGVVYDSDPDLEW HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCEEEECCCCCCCH QETMNKARALFRAVAQAARGL HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1987141 [H]