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The map label for this gene is rpe [H]

Identifier: 182680727

GI number: 182680727

Start: 214642

End: 215313

Strand: Direct

Name: rpe [H]

Synonym: XfasM23_0156

Alternate gene names: 182680727

Gene position: 214642-215313 (Clockwise)

Preceding gene: 182680726

Following gene: 182680728

Centisome position: 8.46

GC content: 52.83

Gene sequence:

>672_bases
ATGTCCAATTGTCTGATTGCTCCATCCATTCTTTCCGCTGACTTTGCCCGTCTTGGGGCTGAGGTGGATGCTGTACTTGC
GGCGGGTGCCGATTGGATCCATTTCGATGTGATGGATAATCATTACGTACCAAATTTGACCTTTGGTCCGATGGTGTGCA
AGGCGTTGCGTAGTTACGGCATCACTGCGCCAATTGATGTGCATTTGATGGTGGAGCCAGTAGACCGGATCGTGCCGGAT
TTTGCTCAGGCCGGTGCCAGCATGATCAGCTTTCATATGGAAGCCAGCCGTCATGTGCACCGTACTATTCAGCTCATCAA
GTCCCATGGTTGCATGGCTGGCTTAGTATTTAATCCGGCGACACCGGTTGATATGTTGGATTGGGTGCTGCCTGAATTGG
ATCTCGTCCTGTTGATGTCTGTCAATCCCGGTTTTGGTGGTCAGAGGTTCATTCCTGGTACGCTGGATAAGCTGCGCTTG
GTGCGTAAAAAGATCGATCTGCTTGGTAGGCCTGTGCGCTTGCAGGTTGATGGAGGGGTCGGCATTGACAATATCGGCGC
GATTGCTGAGGCCGGCGCTGATACCTTTGTTGCCGGTTCGGCGATCTTCCATGCACGTGATTATGCTGATGTGGTCGCTC
AGATGCGTGCAGCGGTTGCGGCGGTTAGGTGA

Upstream 100 bases:

>100_bases
AGGTGCGCCAGATCAATGCTGCGTATGATCGTATTCAGCGTCGCTGTCGGCGTTGATCTTGGCTCAGGTATCGGGTCATT
CACTTTCCTCAGAGCGTTTC

Downstream 100 bases:

>100_bases
GGTCCTCGTATGTGTTGGGTGTGGTGACCGTCGTATCGAACGGTGTATGCCGACCCTATGTCAATGAGTGCATTTGCACA
CTACTAATGCTGTATTTGTA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSNCLIAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYGITAPIDVHLMVEPVDRIVPD
FAQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPATPVDMLDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRL
VRKKIDLLGRPVRLQVDGGVGIDNIGAIAEAGADTFVAGSAIFHARDYADVVAQMRAAVAAVR

Sequences:

>Translated_223_residues
MSNCLIAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYGITAPIDVHLMVEPVDRIVPD
FAQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPATPVDMLDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRL
VRKKIDLLGRPVRLQVDGGVGIDNIGAIAEAGADTFVAGSAIFHARDYADVVAQMRAAVAAVR
>Mature_222_residues
SNCLIAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYGITAPIDVHLMVEPVDRIVPDF
AQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPATPVDMLDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLV
RKKIDLLGRPVRLQVDGGVGIDNIGAIAEAGADTFVAGSAIFHARDYADVVAQMRAAVAAVR

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=216, Percent_Identity=41.2037037037037, Blast_Score=162, Evalue=2e-40,
Organism=Homo sapiens, GI219879828, Length=216, Percent_Identity=39.3518518518519, Blast_Score=153, Evalue=1e-37,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=32.7380952380952, Blast_Score=91, Evalue=8e-19,
Organism=Escherichia coli, GI1789788, Length=222, Percent_Identity=71.1711711711712, Blast_Score=324, Evalue=3e-90,
Organism=Escherichia coli, GI1790523, Length=221, Percent_Identity=33.4841628959276, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1790754, Length=211, Percent_Identity=31.7535545023697, Blast_Score=99, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17552948, Length=221, Percent_Identity=43.8914027149321, Blast_Score=166, Evalue=7e-42,
Organism=Saccharomyces cerevisiae, GI6322341, Length=232, Percent_Identity=42.2413793103448, Blast_Score=181, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24586301, Length=214, Percent_Identity=39.7196261682243, Blast_Score=156, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23968; Mature: 23837

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNCLIAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYG
CCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
ITAPIDVHLMVEPVDRIVPDFAQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPA
CCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
TPVDMLDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLGRPVRLQVDGGV
CCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
GIDNIGAIAEAGADTFVAGSAIFHARDYADVVAQMRAAVAAVR
CCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNCLIAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYG
CCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
ITAPIDVHLMVEPVDRIVPDFAQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPA
CCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
TPVDMLDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLGRPVRLQVDGGV
CCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
GIDNIGAIAEAGADTFVAGSAIFHARDYADVVAQMRAAVAAVR
CCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]