Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680720
Identifier: 182680720
GI number: 182680720
Start: 205601
End: 206308
Strand: Reverse
Name: 182680720
Synonym: XfasM23_0149
Alternate gene names: NA
Gene position: 206308-205601 (Counterclockwise)
Preceding gene: 182680721
Following gene: 182680718
Centisome position: 8.14
GC content: 54.66
Gene sequence:
>708_bases ATGTCCGCAGATCCCTCCTCACTTCCACAACGCCCCTCGCTGCAACGCATCTTCCTCACCGGTTTATTGACGCTACTGCC GGTATGGCTGACATGGGTGGTCGTTAAATTTGTATTCTCGCTTCTCTCAGGCTTCAGCAGTCCTTGGGTCGTGCCACTGT CCGAGCGCATTGCTGCCTCTTTTCCTGGCTACCTTGGCTGGATTCAAGCACTCTGGGTGCAAAATACAATTGCTCTTGGG GTTACACTGCTGGCAATCCTGTTCGTAGGGACACTCAGCCGACGCATGATCGGGCAGCGCCTACTGCGCTGGTTCGAAGC AATCATGCGCCGCATCCCATTCGCCAGCGTCATCTACGACAGCGCCCGCAAACTATTAGACATTCTGCAGACCCAACCGG GTAGCACTCAAAGAGTGGTACTGATTGATTTCCCGCATCGAGACATGAAAGCAGTCGGCTTGGTAACACGGGTCATACGC GACCGCGATACTGGACAGGAACTGGCAGCGGTCTACGTGCCAACCACGCCCAATCCAACCTCTGGCTATCTCGAAATCGT CCCTGTAGAACAACTCACACCCACCAACTGGAGCGTGGATCAAGCAATGAGTTTCATCATCTCCGGTGGCGCAGTATCAC CAGATAGCATCCCGTTCAGCCGAACTACAGACCAAGACGAAGACGGAGCTAAGTCGCCACGGCTATGA
Upstream 100 bases:
>100_bases CATAGTTCTGAAATCTAATATCAGCAGAACATCCTGATCATGAGCAATACACTGAAACTATTATTGACCTGCGTGACCCA CTCTTCCCTACAATAACAGC
Downstream 100 bases:
>100_bases TCTAAGATCAAATCATTCATCACACCACAAGTATTTCTGCCTGTTTGTAGTCGCAATATTGATAAGGGAATAACATCTCC TCATCATTAGCTGATTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSADPSSLPQRPSLQRIFLTGLLTLLPVWLTWVVVKFVFSLLSGFSSPWVVPLSERIAASFPGYLGWIQALWVQNTIALG VTLLAILFVGTLSRRMIGQRLLRWFEAIMRRIPFASVIYDSARKLLDILQTQPGSTQRVVLIDFPHRDMKAVGLVTRVIR DRDTGQELAAVYVPTTPNPTSGYLEIVPVEQLTPTNWSVDQAMSFIISGGAVSPDSIPFSRTTDQDEDGAKSPRL
Sequences:
>Translated_235_residues MSADPSSLPQRPSLQRIFLTGLLTLLPVWLTWVVVKFVFSLLSGFSSPWVVPLSERIAASFPGYLGWIQALWVQNTIALG VTLLAILFVGTLSRRMIGQRLLRWFEAIMRRIPFASVIYDSARKLLDILQTQPGSTQRVVLIDFPHRDMKAVGLVTRVIR DRDTGQELAAVYVPTTPNPTSGYLEIVPVEQLTPTNWSVDQAMSFIISGGAVSPDSIPFSRTTDQDEDGAKSPRL >Mature_234_residues SADPSSLPQRPSLQRIFLTGLLTLLPVWLTWVVVKFVFSLLSGFSSPWVVPLSERIAASFPGYLGWIQALWVQNTIALGV TLLAILFVGTLSRRMIGQRLLRWFEAIMRRIPFASVIYDSARKLLDILQTQPGSTQRVVLIDFPHRDMKAVGLVTRVIRD RDTGQELAAVYVPTTPNPTSGYLEIVPVEQLTPTNWSVDQAMSFIISGGAVSPDSIPFSRTTDQDEDGAKSPRL
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26111; Mature: 25979
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADPSSLPQRPSLQRIFLTGLLTLLPVWLTWVVVKFVFSLLSGFSSPWVVPLSERIAAS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH FPGYLGWIQALWVQNTIALGVTLLAILFVGTLSRRMIGQRLLRWFEAIMRRIPFASVIYD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH SARKLLDILQTQPGSTQRVVLIDFPHRDMKAVGLVTRVIRDRDTGQELAAVYVPTTPNPT HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC SGYLEIVPVEQLTPTNWSVDQAMSFIISGGAVSPDSIPFSRTTDQDEDGAKSPRL CCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SADPSSLPQRPSLQRIFLTGLLTLLPVWLTWVVVKFVFSLLSGFSSPWVVPLSERIAAS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH FPGYLGWIQALWVQNTIALGVTLLAILFVGTLSRRMIGQRLLRWFEAIMRRIPFASVIYD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH SARKLLDILQTQPGSTQRVVLIDFPHRDMKAVGLVTRVIRDRDTGQELAAVYVPTTPNPT HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC SGYLEIVPVEQLTPTNWSVDQAMSFIISGGAVSPDSIPFSRTTDQDEDGAKSPRL CCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA