Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680718
Identifier: 182680718
GI number: 182680718
Start: 203318
End: 203842
Strand: Reverse
Name: 182680718
Synonym: XfasM23_0147
Alternate gene names: NA
Gene position: 203842-203318 (Counterclockwise)
Preceding gene: 182680720
Following gene: 182680712
Centisome position: 8.04
GC content: 45.33
Gene sequence:
>525_bases ATGACCACATTACAGCGGCTCCGCTGCCTTGCTTTGTTCATTGCCATAACTATTGCAATGCCTCTAGTCGCCACAGCCAC GCCACCCAGCGATGCAGATGTAAACCGCCTGCTATCAGTTTCACGCATGCAGGCTATACACGATTCGATGATACCTCAGC TTGAGACAATGGAGGAGAAACAATTTGACCAGATGGCTGCAAAACACACTCTAAGCACGGAAGAAAAAGCAAAAATGGTG CAAATCCTGGAACGCTCCAAACAGAGAATCCGCAAAGCAATGTCATGGTCAGAACTAGAACCAGTATACATAGACTTATA CAAGCACAGTTTCAGCCGTGAAGATGTACTTGCAATGACTAAATTCTACGAAAGCTCAGCAGGGCAAAGCCTGCTCGACA AAACTCCGGTATTGATGCAAAACCTGATGGTCGCAATCCAGAAAAAGATGGCGCCGTTAACGGATGATCTGATGCAAGAT CTTGAAAAAATCGACAATGCACCGAAACAAGATCACAAAAAATGA
Upstream 100 bases:
>100_bases AGAATCATCGCACACGCCGCCATTGTATCGGCAAAGTAACCAAAACGCGTATCACAATACGTTATGATGGGGAGGGATTA ATTACTCAGGAGATACATCA
Downstream 100 bases:
>100_bases GCGTATAACCGAGAAGCAGCGTTTATCATCAGAGTGTACAGATATAAGTCAAAGAATCTGCCGACATCAACGATAACAAC GTAAGGCTTGGACACTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTTLQRLRCLALFIAITIAMPLVATATPPSDADVNRLLSVSRMQAIHDSMIPQLETMEEKQFDQMAAKHTLSTEEKAKMV QILERSKQRIRKAMSWSELEPVYIDLYKHSFSREDVLAMTKFYESSAGQSLLDKTPVLMQNLMVAIQKKMAPLTDDLMQD LEKIDNAPKQDHKK
Sequences:
>Translated_174_residues MTTLQRLRCLALFIAITIAMPLVATATPPSDADVNRLLSVSRMQAIHDSMIPQLETMEEKQFDQMAAKHTLSTEEKAKMV QILERSKQRIRKAMSWSELEPVYIDLYKHSFSREDVLAMTKFYESSAGQSLLDKTPVLMQNLMVAIQKKMAPLTDDLMQD LEKIDNAPKQDHKK >Mature_173_residues TTLQRLRCLALFIAITIAMPLVATATPPSDADVNRLLSVSRMQAIHDSMIPQLETMEEKQFDQMAAKHTLSTEEKAKMVQ ILERSKQRIRKAMSWSELEPVYIDLYKHSFSREDVLAMTKFYESSAGQSLLDKTPVLMQNLMVAIQKKMAPLTDDLMQDL EKIDNAPKQDHKK
Specific function: Unknown
COG id: COG3184
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19897; Mature: 19765
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLQRLRCLALFIAITIAMPLVATATPPSDADVNRLLSVSRMQAIHDSMIPQLETMEEK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFDQMAAKHTLSTEEKAKMVQILERSKQRIRKAMSWSELEPVYIDLYKHSFSREDVLAMT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHCCHHHHHHHH KFYESSAGQSLLDKTPVLMQNLMVAIQKKMAPLTDDLMQDLEKIDNAPKQDHKK HHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTLQRLRCLALFIAITIAMPLVATATPPSDADVNRLLSVSRMQAIHDSMIPQLETMEEK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFDQMAAKHTLSTEEKAKMVQILERSKQRIRKAMSWSELEPVYIDLYKHSFSREDVLAMT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHCCHHHHHHHH KFYESSAGQSLLDKTPVLMQNLMVAIQKKMAPLTDDLMQDLEKIDNAPKQDHKK HHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA