Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is ampG [H]
Identifier: 182680693
GI number: 182680693
Start: 164698
End: 166227
Strand: Direct
Name: ampG [H]
Synonym: XfasM23_0122
Alternate gene names: 182680693
Gene position: 164698-166227 (Clockwise)
Preceding gene: 182680692
Following gene: 182680696
Centisome position: 6.5
GC content: 49.22
Gene sequence:
>1530_bases GTGAGTGACTATTCGGGAAAGTTCGATGTGCATGCTGTTTTGCAAAATGGACGGCGTTTTCTGACTGTGTTGTTGCTTGG TTTTGCCTCGGGATTGCCGCTTGCGTTGACTGGAGGTGCGATGCAGGCATGGTTGACGGTTGAGGGGTTGGATCTTGTCA CGCTTGGTTTTCTTGTATTGGTTGCGGCTCCTTATACGTTCAAGATGCTGTGGGCGCCGTTGATTGATCGATTCGATGTG CCGTGGTTGGGACGGCGGCGTGGGTGGATTGTCTTTATACAGTGGATGCTTGGTGGTGCTTTGTTTCTTATGGGGAGTGT GTCGCCGGTTCACGAGTTGCGGTTGTTTGCGGTTGTTGCGGTGTCTGTTGCGGCGTTGTCTGCAACGTTAGATGTGGTGA TCGACGGTTATCGGACAGATTTGCTTGAGCCTCATCAGCGGGGATTGGGGGGGTCTCTGGCTGTGCTCGGCTATCGGTTA GCAATGGTGTTATCTGGTGGTATTGCTCTGATTTGGGCTGAGCAATGGCATAGCTGGCCACAGGTATATCGGGTGATGGG TGGATTTATGTTTGGTGGTGGCTTGCTTTCGTTATTGTTAATGCCGCGTCTTTCGGGGCGTTTCGTGGCTCCTGTGACTC ATGGTGCACGCGAGTTGTTGGGGTTCTTGGCTTTGCTGGTTGGTGTGGTGGTGGGGGCGCTGTTGAGTCGTTATCTTTTT ATGATGTTTGGATTGGATCCGGGGAGTAAAGAAAGTTGGGTCCGTTTGCTGTTTGTAATAGGAGAGATTTCCGGTGGGGT GCTGTTGGGGTTGTTGTGTATCCGTTTTGTGCGTTTCGAGACATTAAATCGTTCGTTGGCGACGTATTTCCAAATGCAGG GTGCTTTGGCATTTTTGGGGTTGGTGGTGCTCTATAAGGTTGGTGATGCTTTTGCGCTTAGTTTATCTACGCCGTTTCTG ATTAATGGTGCACATTTTAGTCAAACGGAAGTTGGGATTGCTAATAAGACGGTTGGTTTGTTGATGACGATTGTCGGTGC GGTTATCGGTGGTTTTTTTCTATTACGTGTACGTTTGTCCCGGGCCTTGTTTTGGTTCGGTGCGATGCAATTAGTTTCCA ATTTGGGGTTTTATGCATTAGCACGTGTTGGTGCAGGTTTCTGGGGGAGTTCGGTGATTCCGAGCTTTAATGCGTTGATT GTGCATCTTGAGATGCCGACAGAAATGGATCGTCTGTTGTTGTTTGTGTTGAGTCTGGAGAATTTTTCTGGGGGTATGGG TACGGCGGCCTTTGTGGCGTTGTTGAGTAATTTGTGTAATGTTCGATTTTCTGCAACGCACTATGCGTTGCTTTCAGCGT TTGCGTCACTCGGTCGGGTTTTCGTTGGACCATTTGCTGGGGTGCTGGCTGATGCTTGTGGGTGGCAAGCTTTCTTCCTT GTATCTTTATTGGTGGGAGTCCCAGGTTTGGTAATAGCTTGGTGTATGCGTACTGAAATAGATGCAATGAGCTATCGTTT TCCAGGGTGA
Upstream 100 bases:
>100_bases AGTTTGTTTCTCCAGGTTTGCGTGAACGTGTGTCGCGTTGTGCGATTTATTGTGAGCAACGTTTTTCAGATCATGCCCCT TACACTGTGGAGTATGTGTT
Downstream 100 bases:
>100_bases GCGAGGTTGGGGGGCTGTTTGTCGATACATTTACCGATAAATATGTCTGCAGAATTTAAGTAATGAGCTATCAGCAGTAA TCAAGGCTGTGCTGCCAAGG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MSDYSGKFDVHAVLQNGRRFLTVLLLGFASGLPLALTGGAMQAWLTVEGLDLVTLGFLVLVAAPYTFKMLWAPLIDRFDV PWLGRRRGWIVFIQWMLGGALFLMGSVSPVHELRLFAVVAVSVAALSATLDVVIDGYRTDLLEPHQRGLGGSLAVLGYRL AMVLSGGIALIWAEQWHSWPQVYRVMGGFMFGGGLLSLLLMPRLSGRFVAPVTHGARELLGFLALLVGVVVGALLSRYLF MMFGLDPGSKESWVRLLFVIGEISGGVLLGLLCIRFVRFETLNRSLATYFQMQGALAFLGLVVLYKVGDAFALSLSTPFL INGAHFSQTEVGIANKTVGLLMTIVGAVIGGFFLLRVRLSRALFWFGAMQLVSNLGFYALARVGAGFWGSSVIPSFNALI VHLEMPTEMDRLLLFVLSLENFSGGMGTAAFVALLSNLCNVRFSATHYALLSAFASLGRVFVGPFAGVLADACGWQAFFL VSLLVGVPGLVIAWCMRTEIDAMSYRFPG
Sequences:
>Translated_509_residues MSDYSGKFDVHAVLQNGRRFLTVLLLGFASGLPLALTGGAMQAWLTVEGLDLVTLGFLVLVAAPYTFKMLWAPLIDRFDV PWLGRRRGWIVFIQWMLGGALFLMGSVSPVHELRLFAVVAVSVAALSATLDVVIDGYRTDLLEPHQRGLGGSLAVLGYRL AMVLSGGIALIWAEQWHSWPQVYRVMGGFMFGGGLLSLLLMPRLSGRFVAPVTHGARELLGFLALLVGVVVGALLSRYLF MMFGLDPGSKESWVRLLFVIGEISGGVLLGLLCIRFVRFETLNRSLATYFQMQGALAFLGLVVLYKVGDAFALSLSTPFL INGAHFSQTEVGIANKTVGLLMTIVGAVIGGFFLLRVRLSRALFWFGAMQLVSNLGFYALARVGAGFWGSSVIPSFNALI VHLEMPTEMDRLLLFVLSLENFSGGMGTAAFVALLSNLCNVRFSATHYALLSAFASLGRVFVGPFAGVLADACGWQAFFL VSLLVGVPGLVIAWCMRTEIDAMSYRFPG >Mature_508_residues SDYSGKFDVHAVLQNGRRFLTVLLLGFASGLPLALTGGAMQAWLTVEGLDLVTLGFLVLVAAPYTFKMLWAPLIDRFDVP WLGRRRGWIVFIQWMLGGALFLMGSVSPVHELRLFAVVAVSVAALSATLDVVIDGYRTDLLEPHQRGLGGSLAVLGYRLA MVLSGGIALIWAEQWHSWPQVYRVMGGFMFGGGLLSLLLMPRLSGRFVAPVTHGARELLGFLALLVGVVVGALLSRYLFM MFGLDPGSKESWVRLLFVIGEISGGVLLGLLCIRFVRFETLNRSLATYFQMQGALAFLGLVVLYKVGDAFALSLSTPFLI NGAHFSQTEVGIANKTVGLLMTIVGAVIGGFFLLRVRLSRALFWFGAMQLVSNLGFYALARVGAGFWGSSVIPSFNALIV HLEMPTEMDRLLLFVLSLENFSGGMGTAAFVALLSNLCNVRFSATHYALLSAFASLGRVFVGPFAGVLADACGWQAFFLV SLLVGVPGLVIAWCMRTEIDAMSYRFPG
Specific function: Probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=483, Percent_Identity=39.9585921325052, Blast_Score=295, Evalue=3e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 55151; Mature: 55020
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYSGKFDVHAVLQNGRRFLTVLLLGFASGLPLALTGGAMQAWLTVEGLDLVTLGFLVL CCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHHH VAAPYTFKMLWAPLIDRFDVPWLGRRRGWIVFIQWMLGGALFLMGSVSPVHELRLFAVVA HHCCHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHHHHHHHHHCCCCHHHHHHHHHHHH VSVAALSATLDVVIDGYRTDLLEPHQRGLGGSLAVLGYRLAMVLSGGIALIWAEQWHSWP HHHHHHHHHHHHHCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHCCHH QVYRVMGGFMFGGGLLSLLLMPRLSGRFVAPVTHGARELLGFLALLVGVVVGALLSRYLF HHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMFGLDPGSKESWVRLLFVIGEISGGVLLGLLCIRFVRFETLNRSLATYFQMQGALAFLG HHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVLYKVGDAFALSLSTPFLINGAHFSQTEVGIANKTVGLLMTIVGAVIGGFFLLRVRLS HHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RALFWFGAMQLVSNLGFYALARVGAGFWGSSVIPSFNALIVHLEMPTEMDRLLLFVLSLE HHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH NFSGGMGTAAFVALLSNLCNVRFSATHYALLSAFASLGRVFVGPFAGVLADACGWQAFFL CCCCCCHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VSLLVGVPGLVIAWCMRTEIDAMSYRFPG HHHHHCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDYSGKFDVHAVLQNGRRFLTVLLLGFASGLPLALTGGAMQAWLTVEGLDLVTLGFLVL CCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHHH VAAPYTFKMLWAPLIDRFDVPWLGRRRGWIVFIQWMLGGALFLMGSVSPVHELRLFAVVA HHCCHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHHHHHHHHHCCCCHHHHHHHHHHHH VSVAALSATLDVVIDGYRTDLLEPHQRGLGGSLAVLGYRLAMVLSGGIALIWAEQWHSWP HHHHHHHHHHHHHCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHCCHH QVYRVMGGFMFGGGLLSLLLMPRLSGRFVAPVTHGARELLGFLALLVGVVVGALLSRYLF HHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMFGLDPGSKESWVRLLFVIGEISGGVLLGLLCIRFVRFETLNRSLATYFQMQGALAFLG HHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVLYKVGDAFALSLSTPFLINGAHFSQTEVGIANKTVGLLMTIVGAVIGGFFLLRVRLS HHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RALFWFGAMQLVSNLGFYALARVGAGFWGSSVIPSFNALIVHLEMPTEMDRLLLFVLSLE HHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH NFSGGMGTAAFVALLSNLCNVRFSATHYALLSAFASLGRVFVGPFAGVLADACGWQAFFL CCCCCCHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VSLLVGVPGLVIAWCMRTEIDAMSYRFPG HHHHHCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]