Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680673
Identifier: 182680673
GI number: 182680673
Start: 139008
End: 139178
Strand: Direct
Name: 182680673
Synonym: XfasM23_0102
Alternate gene names: NA
Gene position: 139008-139178 (Clockwise)
Preceding gene: 182680671
Following gene: 182680674
Centisome position: 5.48
GC content: 50.29
Gene sequence:
>171_bases ATGGATGCGATGCTGAAGCGTATCGCGGTCAGTCGTGGGAGGGCTGTAGGTTTATTTGCAGTGTATGGTGGGCGATGGGT TGCTTTGTGTTGTGTAAAGGGTCAGCGCAGGTCGGTTGCAGTGGCGGTTGGTCCGGTGATGTTTGCGGGATATTTATTTT TATCTTTTTGA
Upstream 100 bases:
>100_bases GAGCGGTGAAGTGCGGTGTGGGATGGACATGGTGGGTTTGCAGCATGGTTGAAGAACGGCAGTTTGAGGAGGTGTGTGGA GGGCAGAATGCCAGGTGGGG
Downstream 100 bases:
>100_bases TTGGATGTGTTCTTCCCGCCGGGGGAAGGCGGGGCCGGCGGCATCTGTGTTGGTTTGGCTGAGGTTTTATGGGGAGTGCC AATACCAGGTGTTATCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MDAMLKRIAVSRGRAVGLFAVYGGRWVALCCVKGQRRSVAVAVGPVMFAGYLFLSF
Sequences:
>Translated_56_residues MDAMLKRIAVSRGRAVGLFAVYGGRWVALCCVKGQRRSVAVAVGPVMFAGYLFLSF >Mature_56_residues MDAMLKRIAVSRGRAVGLFAVYGGRWVALCCVKGQRRSVAVAVGPVMFAGYLFLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6053; Mature: 6053
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAMLKRIAVSRGRAVGLFAVYGGRWVALCCVKGQRRSVAVAVGPVMFAGYLFLSF CCHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHCC >Mature Secondary Structure MDAMLKRIAVSRGRAVGLFAVYGGRWVALCCVKGQRRSVAVAVGPVMFAGYLFLSF CCHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA