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The map label for this gene is yvcP [H]

Identifier: 170757816

GI number: 170757816

Start: 348396

End: 349262

Strand: Direct

Name: yvcP [H]

Synonym: CLD_0480

Alternate gene names: 170757816

Gene position: 348396-349262 (Clockwise)

Preceding gene: 170756522

Following gene: 170755055

Centisome position: 8.8

GC content: 26.18

Gene sequence:

>867_bases
ATGTTATTAATATTTAGATATGTAGATTTAAATAAAGGTAATTTTGTTCATAATTACTCCTCTAAATTTTATTTAGAGGA
GATTTTTCTATTCAGAAAATTATATATAAATAATATTTTTAATAAATGGTACAATTATATATATAGATGTTTAAAGGTTG
TGATAATTTTGTATAGTATTATGATTATAGAAGATGACAAAAAGATGGCTAAACTTATAGAAAATCACTTAGAACGATAT
GGATATAAAACATTTTTAATTAGAGATTTTTCAAATATAAAAGATGAAGTTCTAGAGTGTAAGCCAGATCTTATTTTAAT
GGATATAAATCTTCCCTTTTTTGACGGATTTTATTGGTGTAGTGATATAAGAAATCATTCTAAAGTACCTATAATATTTA
TATCAGCTAGAGACTCAGATATGGATCAGGTTATGGCAATAGAGAACGGTGGAGATGATTTTATAACAAAGCCCTTTTCT
TATTATGTACTATTAGCAAAGATAAAAGGTGTATTAAGAAGAGTATATGGTAGCTATGCCAAAAATGATACGGATTTTTT
TAAGATTGGTGATTTAATATTATATACAAACAAGAGTATATTAGAATTTAAAGGGAGAAAAACTGAGCTTAGTAAAAATG
AGTTTTCCCTTTTATTATATCTTTTTAAAAATATAAATAAAATTGTTTCAAGAGATACTTTGCTAGAGATTCTTTGGAGT
GATACTGATTTCATTGACGATAATACTCTTTCTGTTAATGTTACAAGACTTAGAAAGAGGCTAGAAGAAGTGGGCATTAC
TAATGCTATAGAGACAAAACGTGGCCAAGGATATATGCTAATTAATAATTGGGAGAGCAAAGAGTAG

Upstream 100 bases:

>100_bases
TTAGTAATAACTAATTCTTCTGAGTATCCTAATATGGTCATAGAAACAGAAAAAGAAGTTAAGGAAAAAGAAAGTGTAAT
TATAACTTTCTAATAAAATT

Downstream 100 bases:

>100_bases
GTGAAGAAAATGAAATTTATAGATTTTCTAAAAGATAGGATAGCTTATATAATAGTATATTTTATAAGTATATCTTTAGT
TATTTTGATAATGCATCTGA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MLLIFRYVDLNKGNFVHNYSSKFYLEEIFLFRKLYINNIFNKWYNYIYRCLKVVIILYSIMIIEDDKKMAKLIENHLERY
GYKTFLIRDFSNIKDEVLECKPDLILMDINLPFFDGFYWCSDIRNHSKVPIIFISARDSDMDQVMAIENGGDDFITKPFS
YYVLLAKIKGVLRRVYGSYAKNDTDFFKIGDLILYTNKSILEFKGRKTELSKNEFSLLLYLFKNINKIVSRDTLLEILWS
DTDFIDDNTLSVNVTRLRKRLEEVGITNAIETKRGQGYMLINNWESKE

Sequences:

>Translated_288_residues
MLLIFRYVDLNKGNFVHNYSSKFYLEEIFLFRKLYINNIFNKWYNYIYRCLKVVIILYSIMIIEDDKKMAKLIENHLERY
GYKTFLIRDFSNIKDEVLECKPDLILMDINLPFFDGFYWCSDIRNHSKVPIIFISARDSDMDQVMAIENGGDDFITKPFS
YYVLLAKIKGVLRRVYGSYAKNDTDFFKIGDLILYTNKSILEFKGRKTELSKNEFSLLLYLFKNINKIVSRDTLLEILWS
DTDFIDDNTLSVNVTRLRKRLEEVGITNAIETKRGQGYMLINNWESKE
>Mature_288_residues
MLLIFRYVDLNKGNFVHNYSSKFYLEEIFLFRKLYINNIFNKWYNYIYRCLKVVIILYSIMIIEDDKKMAKLIENHLERY
GYKTFLIRDFSNIKDEVLECKPDLILMDINLPFFDGFYWCSDIRNHSKVPIIFISARDSDMDQVMAIENGGDDFITKPFS
YYVLLAKIKGVLRRVYGSYAKNDTDFFKIGDLILYTNKSILEFKGRKTELSKNEFSLLLYLFKNINKIVSRDTLLEILWS
DTDFIDDNTLSVNVTRLRKRLEEVGITNAIETKRGQGYMLINNWESKE

Specific function: Member of the two-component regulatory system yvcQ/yvcP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=30.1801801801802, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=31.140350877193, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1786911, Length=207, Percent_Identity=28.5024154589372, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=26.7857142857143, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=28.8793103448276, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=27.3127753303965, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=30.2222222222222, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=27.1929824561404, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=27.6595744680851, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=27.4774774774775, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=25.7918552036199, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=28.6995515695067, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=27.8481012658228, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=27.0742358078603, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 34287; Mature: 34287

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIFRYVDLNKGNFVHNYSSKFYLEEIFLFRKLYINNIFNKWYNYIYRCLKVVIILYSI
CEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIIEDDKKMAKLIENHLERYGYKTFLIRDFSNIKDEVLECKPDLILMDINLPFFDGFYWC
HEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCHHCCHHHH
SDIRNHSKVPIIFISARDSDMDQVMAIENGGDDFITKPFSYYVLLAKIKGVLRRVYGSYA
HHHCCCCCCCEEEEECCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
KNDTDFFKIGDLILYTNKSILEFKGRKTELSKNEFSLLLYLFKNINKIVSRDTLLEILWS
CCCCCCEEECCEEEEECCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DTDFIDDNTLSVNVTRLRKRLEEVGITNAIETKRGQGYMLINNWESKE
CCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MLLIFRYVDLNKGNFVHNYSSKFYLEEIFLFRKLYINNIFNKWYNYIYRCLKVVIILYSI
CEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIIEDDKKMAKLIENHLERYGYKTFLIRDFSNIKDEVLECKPDLILMDINLPFFDGFYWC
HEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCHHCCHHHH
SDIRNHSKVPIIFISARDSDMDQVMAIENGGDDFITKPFSYYVLLAKIKGVLRRVYGSYA
HHHCCCCCCCEEEEECCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
KNDTDFFKIGDLILYTNKSILEFKGRKTELSKNEFSLLLYLFKNINKIVSRDTLLEILWS
CCCCCCEEECCEEEEECCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DTDFIDDNTLSVNVTRLRKRLEEVGITNAIETKRGQGYMLINNWESKE
CCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]