Definition | Clostridium botulinum B1 str. Okra, complete genome. |
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Accession | NC_010516 |
Length | 3,958,233 |
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The map label for this gene is crr [H]
Identifier: 170756522
GI number: 170756522
Start: 347906
End: 348388
Strand: Direct
Name: crr [H]
Synonym: CLD_0481
Alternate gene names: 170756522
Gene position: 347906-348388 (Clockwise)
Preceding gene: 170756179
Following gene: 170757816
Centisome position: 8.79
GC content: 27.95
Gene sequence:
>483_bases ATGTTTTCATTATTTAAAAAGAAAGAAAAAAATTTAAAATTAAAAGCTTACTTATCAGGAAAGGCAATTTCAATTAATAA AGTGCCAGATGAGGTATTTGCATCAAAAATCATGGGAGATGGATTAGCAATTATTCCAACTACAAGTATAGTAAAATCAC CAGCAGATGGTGAAATTATAGTAGTTATGGAGGAGTCTAAACATGCAGTTGGAATTAAATTTGAAAATGGAATAGAAGCA TTGATTCATGTTGGAATTGATACAGTATCTATGAATGGAGAAGGGTTTGAAGTTTTTGTAAAAACAGGAGATTCAGTAAA AGAAGGACAAGATCTTATTATGTTTGATGAAGAATTAATTAAAAATAGAGGCTTATCAACATATACTATGTTAGTAATAA CTAATTCTTCTGAGTATCCTAATATGGTCATAGAAACAGAAAAAGAAGTTAAGGAAAAAGAAAGTGTAATTATAACTTTC TAA
Upstream 100 bases:
>100_bases TTAATGATTAGGGTCGTTATTGTTTCCCAAAAAATTTTACAAAAATAATTTTTAAATAGAACTATTATAATAAAATAAAT TATATTCTAGGAGGTTAAAT
Downstream 100 bases:
>100_bases TAAAATTATGTTATTAATATTTAGATATGTAGATTTAAATAAAGGTAATTTTGTTCATAATTACTCCTCTAAATTTTATT TAGAGGAGATTTTTCTATTC
Product: PTS system, glucose family, EIIA component
Products: Protein Histidine; Sugar Phosphate.; glucose-6-phosphate [Cytoplasm]; pyruvate; alpha,alpha-trehalose 6-phosphate [Cytoplasm] [C]
Alternate protein names: EIIA-Glc; EIII-Glc; PTS system glucose-specific EIIA component [H]
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MFSLFKKKEKNLKLKAYLSGKAISINKVPDEVFASKIMGDGLAIIPTTSIVKSPADGEIIVVMEESKHAVGIKFENGIEA LIHVGIDTVSMNGEGFEVFVKTGDSVKEGQDLIMFDEELIKNRGLSTYTMLVITNSSEYPNMVIETEKEVKEKESVIITF
Sequences:
>Translated_160_residues MFSLFKKKEKNLKLKAYLSGKAISINKVPDEVFASKIMGDGLAIIPTTSIVKSPADGEIIVVMEESKHAVGIKFENGIEA LIHVGIDTVSMNGEGFEVFVKTGDSVKEGQDLIMFDEELIKNRGLSTYTMLVITNSSEYPNMVIETEKEVKEKESVIITF >Mature_160_residues MFSLFKKKEKNLKLKAYLSGKAISINKVPDEVFASKIMGDGLAIIPTTSIVKSPADGEIIVVMEESKHAVGIKFENGIEA LIHVGIDTVSMNGEGFEVFVKTGDSVKEGQDLIMFDEELIKNRGLSTYTMLVITNSSEYPNMVIETEKEVKEKESVIITF
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2190
COG function: function code G; Phosphotransferase system IIA components
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788757, Length=138, Percent_Identity=41.304347826087, Blast_Score=101, Evalue=2e-23, Organism=Escherichia coli, GI1786894, Length=138, Percent_Identity=34.0579710144928, Blast_Score=97, Evalue=4e-22, Organism=Escherichia coli, GI1790159, Length=140, Percent_Identity=35, Blast_Score=97, Evalue=4e-22,
Paralogues:
None
Copy number: 3540 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 140 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR001127 [H]
Pfam domain/function: PF00358 PTS_EIIA_1 [H]
EC number: 2.7.1.69 [C]
Molecular weight: Translated: 17666; Mature: 17666
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSLFKKKEKNLKLKAYLSGKAISINKVPDEVFASKIMGDGLAIIPTTSIVKSPADGEII CCCCCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHCCCEEEEECHHHHCCCCCCEEE VVMEESKHAVGIKFENGIEALIHVGIDTVSMNGEGFEVFVKTGDSVKEGQDLIMFDEELI EEEECCCCEEEEEECCCCEEEEEECCEEEEECCCCEEEEEECCCCCCCCCEEEEECHHHH KNRGLSTYTMLVITNSSEYPNMVIETEKEVKEKESVIITF HHCCCCEEEEEEEECCCCCCCEEEECHHHHHCCCCEEEEC >Mature Secondary Structure MFSLFKKKEKNLKLKAYLSGKAISINKVPDEVFASKIMGDGLAIIPTTSIVKSPADGEII CCCCCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHCCCEEEEECHHHHCCCCCCEEE VVMEESKHAVGIKFENGIEALIHVGIDTVSMNGEGFEVFVKTGDSVKEGQDLIMFDEELI EEEECCCCEEEEEECCCCEEEEEECCEEEEECCCCEEEEEECCCCCCCCCEEEEECHHHH KNRGLSTYTMLVITNSSEYPNMVIETEKEVKEKESVIITF HHCCCCEEEEEEEECCCCCCCEEEECHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein N-Phosphohistidine; Sugar; phosphoenolpyruvate; beta-D-glucose [Periplasm]; phosphoenolpyruvate; trehalose [Periplasm] [C]
Specific reaction: Protein N-Phosphohistidine + Sugar = Protein Histidine + Sugar Phosphate. phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + trehalose [Periplasm] = alpha,alpha-trehalose 6-phosphate [Cytop
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA