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The map label for this gene is dedA [H]

Identifier: 170757691

GI number: 170757691

Start: 3720190

End: 3720840

Strand: Reverse

Name: dedA [H]

Synonym: CLD_1098

Alternate gene names: 170757691

Gene position: 3720840-3720190 (Counterclockwise)

Preceding gene: 170755760

Following gene: 170755166

Centisome position: 94.0

GC content: 29.03

Gene sequence:

>651_bases
ATGAGTATTATAGGAAATTTTATTAATGCATTATTGCATTTGGATAAATATTTAAATGTAATAATACAAAATTATGGAGT
GTGGACATATGCCCTTATATTTCTAATTATATTTTGTGAGACAGGATTAGTTATTACTCCATTCCTGCCCGGAGATTCTA
TTTTATTTGCAACAGGAGCATTTGCAGCAGCAGGATCTCTCAAAATGTTAATGTTATTTGTTGTATTTTATCTAGCAGCT
GTAATTGGTGATACAGTTAATTATCATATAGGACAGAAAGTCGGAACTAAAATTTTAGAAAAAGAAGATGTAAAATATAT
AAATAAGGAATATCTTAAAAAAGCACATACTTTTTATAAAAAGCATGGTTCTATGGCTATAGTAGTAGGAAGATTTATAC
CTATAATAAGAACTTTTGTACCTTTTGTAGCTGGAATAGGGGAGATGAGTTACTCAAAGTTTATTATTTATAATTTGTTA
GGTGGATTATTGTGGGTTGCATTGTTTTTAGGTGGAGGGTATTTATTTGGAGATTTACCTTTTATAAAACAGCATTTTTC
ATATATATTGGTTGCTATTGTAATAATATCCATTATTCCGGGAGTGGTTGTGTTTATTAGGGAAAAGAGAAATGGAGGTA
AGAAAGAATAA

Upstream 100 bases:

>100_bases
AATATATAACAGGATAAACACAAACTATATTAAAATATTAACTTTTAATGTGATTAATAAAAGAGTTTATAGAAAAACTC
AGCAATGAAGGGAGAAAAAT

Downstream 100 bases:

>100_bases
GATGTTATTGATACAGAATATTGATAATTGTATTCTATATGTTATTAAGAAATATGTACAAAATAAATATTTAGATATAT
TGATGCCTAGAATAACAAAA

Product: protein DedA (protein DSG-1)

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSIIGNFINALLHLDKYLNVIIQNYGVWTYALIFLIIFCETGLVITPFLPGDSILFATGAFAAAGSLKMLMLFVVFYLAA
VIGDTVNYHIGQKVGTKILEKEDVKYINKEYLKKAHTFYKKHGSMAIVVGRFIPIIRTFVPFVAGIGEMSYSKFIIYNLL
GGLLWVALFLGGGYLFGDLPFIKQHFSYILVAIVIISIIPGVVVFIREKRNGGKKE

Sequences:

>Translated_216_residues
MSIIGNFINALLHLDKYLNVIIQNYGVWTYALIFLIIFCETGLVITPFLPGDSILFATGAFAAAGSLKMLMLFVVFYLAA
VIGDTVNYHIGQKVGTKILEKEDVKYINKEYLKKAHTFYKKHGSMAIVVGRFIPIIRTFVPFVAGIGEMSYSKFIIYNLL
GGLLWVALFLGGGYLFGDLPFIKQHFSYILVAIVIISIIPGVVVFIREKRNGGKKE
>Mature_215_residues
SIIGNFINALLHLDKYLNVIIQNYGVWTYALIFLIIFCETGLVITPFLPGDSILFATGAFAAAGSLKMLMLFVVFYLAAV
IGDTVNYHIGQKVGTKILEKEDVKYINKEYLKKAHTFYKKHGSMAIVVGRFIPIIRTFVPFVAGIGEMSYSKFIIYNLLG
GLLWVALFLGGGYLFGDLPFIKQHFSYILVAIVIISIIPGVVVFIREKRNGGKKE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=48.0952380952381, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI1789384, Length=169, Percent_Identity=32.5443786982249, Blast_Score=106, Evalue=9e-25,
Organism=Escherichia coli, GI1789481, Length=155, Percent_Identity=34.1935483870968, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1786252, Length=208, Percent_Identity=26.4423076923077, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24114; Mature: 23983

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIGNFINALLHLDKYLNVIIQNYGVWTYALIFLIIFCETGLVITPFLPGDSILFATGA
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHH
FAAAGSLKMLMLFVVFYLAAVIGDTVNYHIGQKVGTKILEKEDVKYINKEYLKKAHTFYK
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHGSMAIVVGRFIPIIRTFVPFVAGIGEMSYSKFIIYNLLGGLLWVALFLGGGYLFGDLP
HCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH
FIKQHFSYILVAIVIISIIPGVVVFIREKRNGGKKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIIGNFINALLHLDKYLNVIIQNYGVWTYALIFLIIFCETGLVITPFLPGDSILFATGA
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHH
FAAAGSLKMLMLFVVFYLAAVIGDTVNYHIGQKVGTKILEKEDVKYINKEYLKKAHTFYK
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHGSMAIVVGRFIPIIRTFVPFVAGIGEMSYSKFIIYNLLGGLLWVALFLGGGYLFGDLP
HCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH
FIKQHFSYILVAIVIISIIPGVVVFIREKRNGGKKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]