Definition | Clostridium botulinum B1 str. Okra, complete genome. |
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Accession | NC_010516 |
Length | 3,958,233 |
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The map label for this gene is 170757582
Identifier: 170757582
GI number: 170757582
Start: 1353689
End: 1354504
Strand: Reverse
Name: 170757582
Synonym: CLD_3349
Alternate gene names: NA
Gene position: 1354504-1353689 (Counterclockwise)
Preceding gene: 170756557
Following gene: 170755996
Centisome position: 34.22
GC content: 28.92
Gene sequence:
>816_bases ATGGAATGTAAGATAAAAGACATATCTATAAACTATGAAATAATAGGTAATGGAAAACCTATTATTATGTTACACGGTTA TTCTGTAGACCACAGATTAATGCGAGGATGTATGGAACCTATTTTTAATGATAAAAGTGATTATAAAAGAATTTATATTG ACTTGCCAGGCATGGGAAAATCAGAAAGTGCAGAATGGATTAGCAACTCTGATACTATGCTTGACATTATAATTGAATTC ATAAAAAGGATCATTCCAAATGAAAATTTTCTACTTGCAGGAGAATCATATGGCGGTTATCTGTCAAGAGGAATAATTTA TAAAATGGCAAATATGGTAGATGGAGTTGTATTAATCTGTCCAGTTATAATAGCAGATAATAAAAAACGAAATGTTCCTG ATCATGTTGTTTTAGTAAAAGATAATAAGTTATTATCTAAATTAACATCAGAGGATGCTGAAGCTTTTAACTCTATGACA GTGGTTCAAAGTAAAAAAATATATGAAAAATATAAAAATGAAATAATATCTGGTGTTAAAATGGCAAATAAAAATTTTTT AGAATTTCTTATGAAAAATGGATATGAATTTTCGTTTGATGTAGATAACATAAATAAAAAATTTAATAAGCCTGCTCTTG TACTATTAGGTAAACAAGACTCTTGTGTAGGTTATAAGGATGCCTGGAATATATTAAATAACTTTCCAAGAGCAACTTTT GCTGTACTGGATAGAGCCGGACATAATTTACAGATAGAGCAAGAAGAACTATTCAATTCATTAATTAAAGAATGGCTTGT ACGAGTTAGCGCATAG
Upstream 100 bases:
>100_bases CTTTTACACCACATATCCCTATTTTTTAAACCAATGGAAGCTAGTATAACCTTTTAAAGCTAATTTTCTGTAGAGTAAGA GAAAAAAAGGAGAAAGAATT
Downstream 100 bases:
>100_bases TATACCAAAAAGATTATATTTTGTACTAATATTATAAAATCATTCTAACACTTCTTAAAATTATTAAAACAATAAATACT TTTAGAGAAAATAGATATCT
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Superfamily Protein; Haloalkane Dehalogenase; LOW QUALITY PROTEIN Hydrolase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Superfamily Hydrolase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MECKIKDISINYEIIGNGKPIIMLHGYSVDHRLMRGCMEPIFNDKSDYKRIYIDLPGMGKSESAEWISNSDTMLDIIIEF IKRIIPNENFLLAGESYGGYLSRGIIYKMANMVDGVVLICPVIIADNKKRNVPDHVVLVKDNKLLSKLTSEDAEAFNSMT VVQSKKIYEKYKNEIISGVKMANKNFLEFLMKNGYEFSFDVDNINKKFNKPALVLLGKQDSCVGYKDAWNILNNFPRATF AVLDRAGHNLQIEQEELFNSLIKEWLVRVSA
Sequences:
>Translated_271_residues MECKIKDISINYEIIGNGKPIIMLHGYSVDHRLMRGCMEPIFNDKSDYKRIYIDLPGMGKSESAEWISNSDTMLDIIIEF IKRIIPNENFLLAGESYGGYLSRGIIYKMANMVDGVVLICPVIIADNKKRNVPDHVVLVKDNKLLSKLTSEDAEAFNSMT VVQSKKIYEKYKNEIISGVKMANKNFLEFLMKNGYEFSFDVDNINKKFNKPALVLLGKQDSCVGYKDAWNILNNFPRATF AVLDRAGHNLQIEQEELFNSLIKEWLVRVSA >Mature_271_residues MECKIKDISINYEIIGNGKPIIMLHGYSVDHRLMRGCMEPIFNDKSDYKRIYIDLPGMGKSESAEWISNSDTMLDIIIEF IKRIIPNENFLLAGESYGGYLSRGIIYKMANMVDGVVLICPVIIADNKKRNVPDHVVLVKDNKLLSKLTSEDAEAFNSMT VVQSKKIYEKYKNEIISGVKMANKNFLEFLMKNGYEFSFDVDNINKKFNKPALVLLGKQDSCVGYKDAWNILNNFPRATF AVLDRAGHNLQIEQEELFNSLIKEWLVRVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30952; Mature: 30952
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECKIKDISINYEIIGNGKPIIMLHGYSVDHRLMRGCMEPIFNDKSDYKRIYIDLPGMGK CCCEEEEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC SESAEWISNSDTMLDIIIEFIKRIIPNENFLLAGESYGGYLSRGIIYKMANMVDGVVLIC CCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHH PVIIADNKKRNVPDHVVLVKDNKLLSKLTSEDAEAFNSMTVVQSKKIYEKYKNEIISGVK HHHEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MANKNFLEFLMKNGYEFSFDVDNINKKFNKPALVLLGKQDSCVGYKDAWNILNNFPRATF HHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHH AVLDRAGHNLQIEQEELFNSLIKEWLVRVSA HHHHHCCCCCEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MECKIKDISINYEIIGNGKPIIMLHGYSVDHRLMRGCMEPIFNDKSDYKRIYIDLPGMGK CCCEEEEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC SESAEWISNSDTMLDIIIEFIKRIIPNENFLLAGESYGGYLSRGIIYKMANMVDGVVLIC CCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHH PVIIADNKKRNVPDHVVLVKDNKLLSKLTSEDAEAFNSMTVVQSKKIYEKYKNEIISGVK HHHEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MANKNFLEFLMKNGYEFSFDVDNINKKFNKPALVLLGKQDSCVGYKDAWNILNNFPRATF HHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHH AVLDRAGHNLQIEQEELFNSLIKEWLVRVSA HHHHHCCCCCEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA