Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170756557

Identifier: 170756557

GI number: 170756557

Start: 1354817

End: 1355785

Strand: Reverse

Name: 170756557

Synonym: CLD_3348

Alternate gene names: NA

Gene position: 1355785-1354817 (Counterclockwise)

Preceding gene: 170756101

Following gene: 170757582

Centisome position: 34.25

GC content: 27.86

Gene sequence:

>969_bases
ATGAATTTTATAGATATGCATTGTGACACTATATACGCTCTTATAAATAAAAAACCCTGCTCTAATAAAAACATTGCAAT
AAGTGAAAATGAAACTTTATATAAAAACTCATTAAGTGTAGATATAGAAAAACTGGAAGCTTCCAATTCTCTAGCTCAAT
TTTTTGCTTTGTTTATAGATATAAATGAAACTAACTCTCCTTTAAAAACTACACTTAATATGTTAGATTTTTTTCATAAT
GAATTGGCAAAACACTCAAAGTATATTGCACTTTCTAAAAACTATGAAGATATAAATAAAAACCTATCAAATAATAAAAT
CTCTGCTTTTTTAACTATAGAAGAAGGAGCTGCTTTGGAAGGCACTTTATATAATCTTAGAAATTTTTATAGATTAGGTG
TTAGACTTATAACCCTAACCTGGAACTTTCCTAATGAAATAGGATTTCCAAACTGCAAAAAAGAATTCATGAATAAGGGC
TTGACTCCCTTTGGATTAGAAGTAGTAGAAGAAATGAACAAATTAAGAATGATAATAGATGTATCTCATCTATCCGATGG
AGGTTTTTATGATGTAGTAAGATACTCGAAATCTCCTTTTGTGGCCTCTCATTCAAATGCAAGAACTATAACAAATCATC
CTAGAAACTTAACAGATGATATGATAAAAATTTTATCTAATAAAGGTGGTGTTATGGGAATAAATTTTGAAAAAACTTTT
TTAGGTCAAAGTGAAGAAGGAAAAATATCAGAAATGATAGATCATATAAAACATATAAAAAATGTAGGCGGAATTGATGT
AATGTGCATAGGCTCAGATTTTGATGGCATCGAAACTCCTAGTGAAATAAAATCTAGTGATGACATAGAAAAACTAATAA
ATGCACTAAAAAAGGAAAGCTTTCATGAAAGTGAAATAGAAAAAATACTATACAAAAATGCGCTTAGGGTTATAAAAGAA
ATTTTATAA

Upstream 100 bases:

>100_bases
AATCATACATATTTATGTGGTTATAAGTTAATCTTAAATATGCTCATACATACTAATTTTTTTGCAATATAATAATTTCT
ATATAAACTGGAGGTACAAA

Downstream 100 bases:

>100_bases
GAAAATTACGATTTAAAAGTGAGTTACACTACCATTGGTTTAAAAAAGGGATATGTGTTTAGAAAGGCAACTCACTTCGA
TAAGAGATTCTAATTTGTTT

Product: dipeptidase family protein

Products: NA

Alternate protein names: ORF X [H]

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNFIDMHCDTIYALINKKPCSNKNIAISENETLYKNSLSVDIEKLEASNSLAQFFALFIDINETNSPLKTTLNMLDFFHN
ELAKHSKYIALSKNYEDINKNLSNNKISAFLTIEEGAALEGTLYNLRNFYRLGVRLITLTWNFPNEIGFPNCKKEFMNKG
LTPFGLEVVEEMNKLRMIIDVSHLSDGGFYDVVRYSKSPFVASHSNARTITNHPRNLTDDMIKILSNKGGVMGINFEKTF
LGQSEEGKISEMIDHIKHIKNVGGIDVMCIGSDFDGIETPSEIKSSDDIEKLINALKKESFHESEIEKILYKNALRVIKE
IL

Sequences:

>Translated_322_residues
MNFIDMHCDTIYALINKKPCSNKNIAISENETLYKNSLSVDIEKLEASNSLAQFFALFIDINETNSPLKTTLNMLDFFHN
ELAKHSKYIALSKNYEDINKNLSNNKISAFLTIEEGAALEGTLYNLRNFYRLGVRLITLTWNFPNEIGFPNCKKEFMNKG
LTPFGLEVVEEMNKLRMIIDVSHLSDGGFYDVVRYSKSPFVASHSNARTITNHPRNLTDDMIKILSNKGGVMGINFEKTF
LGQSEEGKISEMIDHIKHIKNVGGIDVMCIGSDFDGIETPSEIKSSDDIEKLINALKKESFHESEIEKILYKNALRVIKE
IL
>Mature_322_residues
MNFIDMHCDTIYALINKKPCSNKNIAISENETLYKNSLSVDIEKLEASNSLAQFFALFIDINETNSPLKTTLNMLDFFHN
ELAKHSKYIALSKNYEDINKNLSNNKISAFLTIEEGAALEGTLYNLRNFYRLGVRLITLTWNFPNEIGFPNCKKEFMNKG
LTPFGLEVVEEMNKLRMIIDVSHLSDGGFYDVVRYSKSPFVASHSNARTITNHPRNLTDDMIKILSNKGGVMGINFEKTF
LGQSEEGKISEMIDHIKHIKNVGGIDVMCIGSDFDGIETPSEIKSSDDIEKLINALKKESFHESEIEKILYKNALRVIKE
IL

Specific function: Unknown

COG id: COG2355

COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M19 family [H]

Homologues:

Organism=Homo sapiens, GI189458885, Length=291, Percent_Identity=27.1477663230241, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI4758190, Length=291, Percent_Identity=27.1477663230241, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI11641269, Length=276, Percent_Identity=31.8840579710145, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI193211608, Length=278, Percent_Identity=30.5755395683453, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI193211610, Length=278, Percent_Identity=30.9352517985612, Blast_Score=135, Evalue=7e-32,
Organism=Drosophila melanogaster, GI221475880, Length=290, Percent_Identity=30, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI281362638, Length=289, Percent_Identity=30.4498269896194, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI281362636, Length=289, Percent_Identity=30.4498269896194, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI161083233, Length=287, Percent_Identity=26.1324041811847, Blast_Score=143, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008257 [H]

Pfam domain/function: PF01244 Peptidase_M19 [H]

EC number: NA

Molecular weight: Translated: 36551; Mature: 36551

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFIDMHCDTIYALINKKPCSNKNIAISENETLYKNSLSVDIEKLEASNSLAQFFALFID
CCEEHHHHHHHHHHHCCCCCCCCCEEECCCCEEECCCCCHHHHHHHCCHHHHHHHHHHEE
INETNSPLKTTLNMLDFFHNELAKHSKYIALSKNYEDINKNLSNNKISAFLTIEEGAALE
ECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCH
GTLYNLRNFYRLGVRLITLTWNFPNEIGFPNCKKEFMNKGLTPFGLEVVEEMNKLRMIID
HHHHHHHHHHHHCEEEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEEE
VSHLSDGGFYDVVRYSKSPFVASHSNARTITNHPRNLTDDMIKILSNKGGVMGINFEKTF
EEECCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHH
LGQSEEGKISEMIDHIKHIKNVGGIDVMCIGSDFDGIETPSEIKSSDDIEKLINALKKES
CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCC
FHESEIEKILYKNALRVIKEIL
CCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNFIDMHCDTIYALINKKPCSNKNIAISENETLYKNSLSVDIEKLEASNSLAQFFALFID
CCEEHHHHHHHHHHHCCCCCCCCCEEECCCCEEECCCCCHHHHHHHCCHHHHHHHHHHEE
INETNSPLKTTLNMLDFFHNELAKHSKYIALSKNYEDINKNLSNNKISAFLTIEEGAALE
ECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCH
GTLYNLRNFYRLGVRLITLTWNFPNEIGFPNCKKEFMNKGLTPFGLEVVEEMNKLRMIID
HHHHHHHHHHHHCEEEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEEE
VSHLSDGGFYDVVRYSKSPFVASHSNARTITNHPRNLTDDMIKILSNKGGVMGINFEKTF
EEECCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHH
LGQSEEGKISEMIDHIKHIKNVGGIDVMCIGSDFDGIETPSEIKSSDDIEKLINALKKES
CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCC
FHESEIEKILYKNALRVIKEIL
CCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1313537 [H]