| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170757353
Identifier: 170757353
GI number: 170757353
Start: 3674353
End: 3674706
Strand: Reverse
Name: 170757353
Synonym: CLD_1139
Alternate gene names: NA
Gene position: 3674706-3674353 (Counterclockwise)
Preceding gene: 170755386
Following gene: 170754817
Centisome position: 92.84
GC content: 32.77
Gene sequence:
>354_bases ATGGATAAATTAATCTGTAGTGCTCAAAATTGCATAAATAATTTACAAGGGCGTTGCACAGCAAGGTCTATAGAGGTAGA AAATAATGATTCTCATAGCCAATGCAAAACCTTTGCAGCAAAGGGAGGCATCGAAACTATGAGTAGATTTCATAATACAA ATCTAACAGAAGGTTTTAAAGACATGTTTACAGAGGAAAGCAACATGGTTCCAGAAGTTAATTGTGAAGTTTATAGTTGT GTTCATAATAATGATAGAAGATGTAATGCAGATGCCATAGAGATAAATGGAGATGAGGTAAGAACAAGAAATAGCAGTGA AACTATTTGTTCAACTTATAAAAGAGAAGAATAA
Upstream 100 bases:
>100_bases CTTAACATAGGCATATATAATAAAAGTATTTTATATATTATGAATACAAAAGCCTTATTAACAAAAACTAAGGATATATT TTTGTTAGGAGGTAGTTAGG
Downstream 100 bases:
>100_bases ACTGTATTTTAAAATATCCATTACAATTCTTAATTATAAAATTTTATTTTAAATCATATAAATAGAAATAGTATATAAAA ATATTAAAATAAATTCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MDKLICSAQNCINNLQGRCTARSIEVENNDSHSQCKTFAAKGGIETMSRFHNTNLTEGFKDMFTEESNMVPEVNCEVYSC VHNNDRRCNADAIEINGDEVRTRNSSETICSTYKREE
Sequences:
>Translated_117_residues MDKLICSAQNCINNLQGRCTARSIEVENNDSHSQCKTFAAKGGIETMSRFHNTNLTEGFKDMFTEESNMVPEVNCEVYSC VHNNDRRCNADAIEINGDEVRTRNSSETICSTYKREE >Mature_117_residues MDKLICSAQNCINNLQGRCTARSIEVENNDSHSQCKTFAAKGGIETMSRFHNTNLTEGFKDMFTEESNMVPEVNCEVYSC VHNNDRRCNADAIEINGDEVRTRNSSETICSTYKREE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13252; Mature: 13252
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLICSAQNCINNLQGRCTARSIEVENNDSHSQCKTFAAKGGIETMSRFHNTNLTEGFK CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHH DMFTEESNMVPEVNCEVYSCVHNNDRRCNADAIEINGDEVRTRNSSETICSTYKREE HHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCEECCCCCHHHHHHHCCCC >Mature Secondary Structure MDKLICSAQNCINNLQGRCTARSIEVENNDSHSQCKTFAAKGGIETMSRFHNTNLTEGFK CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHH DMFTEESNMVPEVNCEVYSCVHNNDRRCNADAIEINGDEVRTRNSSETICSTYKREE HHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCEECCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA