| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757136
Identifier: 170757136
GI number: 170757136
Start: 428943
End: 429230
Strand: Direct
Name: 170757136
Synonym: CLD_0406
Alternate gene names: NA
Gene position: 428943-429230 (Clockwise)
Preceding gene: 170756566
Following gene: 170754509
Centisome position: 10.84
GC content: 31.6
Gene sequence:
>288_bases ATGAGTGTTTTCGTTGTGGGAGGAGATAGGATTCAAACCATAAAAGAAAACTTAAAAGAAATGGGATTTAATAAAATAAG CCATGTTACAGGTAGAAGAACTAGACATAGAAAAATACAGGTACCTACCAATACAGATTTAGTTTTAATATTGACAGATT ATGTTGGGCACACTGTGGTAGAATCCATAAAAGAACAAAGTAAATCTCAAAATACTAGGATAGTTTATTCCAGAAGAGCT TGGACTAGTATCGAGAAAACATTAAAGGATACTATAGAGGAAAATTAA
Upstream 100 bases:
>100_bases ATATATCATTTGTTATATAATTTAAATGAAATTGATTCTCACTTTCGCCAAGGAGCGAATATAATATAAATTAAAAATAG ATAGTTTAGGGGTGTTATTC
Downstream 100 bases:
>100_bases TGTTAATAGTGCGTGTTATTAAATTAAGGAAAAAGGGATTAATACATTAAAAGGAGTTAAATATGAGTAGAAATTTAGTG ACGAAGTATATGAATGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSVFVVGGDRIQTIKENLKEMGFNKISHVTGRRTRHRKIQVPTNTDLVLILTDYVGHTVVESIKEQSKSQNTRIVYSRRA WTSIEKTLKDTIEEN
Sequences:
>Translated_95_residues MSVFVVGGDRIQTIKENLKEMGFNKISHVTGRRTRHRKIQVPTNTDLVLILTDYVGHTVVESIKEQSKSQNTRIVYSRRA WTSIEKTLKDTIEEN >Mature_94_residues SVFVVGGDRIQTIKENLKEMGFNKISHVTGRRTRHRKIQVPTNTDLVLILTDYVGHTVVESIKEQSKSQNTRIVYSRRAW TSIEKTLKDTIEEN
Specific function: Unknown
COG id: COG4378
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10972; Mature: 10841
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFVVGGDRIQTIKENLKEMGFNKISHVTGRRTRHRKIQVPTNTDLVLILTDYVGHTVV CEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCEEEEEHHHHHHHHH ESIKEQSKSQNTRIVYSRRAWTSIEKTLKDTIEEN HHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVFVVGGDRIQTIKENLKEMGFNKISHVTGRRTRHRKIQVPTNTDLVLILTDYVGHTVV EEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCEEEEEHHHHHHHHH ESIKEQSKSQNTRIVYSRRAWTSIEKTLKDTIEEN HHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA