Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754509

Identifier: 170754509

GI number: 170754509

Start: 429293

End: 429883

Strand: Direct

Name: 170754509

Synonym: CLD_0405

Alternate gene names: NA

Gene position: 429293-429883 (Clockwise)

Preceding gene: 170757136

Following gene: 170756879

Centisome position: 10.85

GC content: 23.18

Gene sequence:

>591_bases
ATGAGTAGAAATTTAGTGACGAAGTATATGAATGTTATAAATGCTATGGAAAATAAAAAATATTTATATTCCTTACTTTT
GTATTTAATTGCTCCAACCTTAGACGGAGTAAAACCATCCACTATTGTTACTTTAAGTACAAGTGGTAAAAATTTAGATT
TATTATGGAGTAAATATAAAAAGGAGTTTCTAGATATTTATAAAATTAATTATATAGAATTGAAGAAAACAGATAAATGT
ACAACTATTTTGTTTTATCATAAAGAAGCATTAAATAAGGTACTATACAATAAATATAATTTAGAATTTTTAGAAGAAAC
AGGATATAGAGATTTTTCTAATGAAGAATCATTTTTATTAAAATTAAAAAGCAGATTTAAAGATACTTGCCCTCACGAAA
TAGGTATTTTTTTAGGTATACCTATAGAGGAAGTAAAATCTTTTATAGAAGATCCCAAAAGAGAATGTATATATTGTGGT
TATTGGAAAGTTTATAACAATATACAAAAGGCTAAAAAGCAATTTACAACTTATGATATAAGCAGGACTAATATGATTTT
AGAAGTATTAGAAAAAGAATTAAATGTATAA

Upstream 100 bases:

>100_bases
TCGAGAAAACATTAAAGGATACTATAGAGGAAAATTAATGTTAATAGTGCGTGTTATTAAATTAAGGAAAAAGGGATTAA
TACATTAAAAGGAGTTAAAT

Downstream 100 bases:

>100_bases
TTAATATTAAATTATTTTTAGCCATGGACAGTATAGATGGGAAGAGTAAAGGATATAGAAATAGATTTACATAAGATATA
TGATAAATTAGAAATAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTLSTSGKNLDLLWSKYKKEFLDIYKINYIELKKTDKC
TTILFYHKEALNKVLYNKYNLEFLEETGYRDFSNEESFLLKLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCG
YWKVYNNIQKAKKQFTTYDISRTNMILEVLEKELNV

Sequences:

>Translated_196_residues
MSRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTLSTSGKNLDLLWSKYKKEFLDIYKINYIELKKTDKC
TTILFYHKEALNKVLYNKYNLEFLEETGYRDFSNEESFLLKLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCG
YWKVYNNIQKAKKQFTTYDISRTNMILEVLEKELNV
>Mature_195_residues
SRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTLSTSGKNLDLLWSKYKKEFLDIYKINYIELKKTDKCT
TILFYHKEALNKVLYNKYNLEFLEETGYRDFSNEESFLLKLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCGY
WKVYNNIQKAKKQFTTYDISRTNMILEVLEKELNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23245; Mature: 23114

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTLSTSGKNLDLLWSKYK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH
KEFLDIYKINYIELKKTDKCTTILFYHKEALNKVLYNKYNLEFLEETGYRDFSNEESFLL
HHHHHHHHCCEEEEECCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHH
KLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCGYWKVYNNIQKAKKQFTTYDI
HHHHHHHHCCCCCCCEEECCCHHHHHHHHHCHHHCEEEEHHHHHHHHHHHHHHHHHHHCC
SRTNMILEVLEKELNV
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTLSTSGKNLDLLWSKYK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH
KEFLDIYKINYIELKKTDKCTTILFYHKEALNKVLYNKYNLEFLEETGYRDFSNEESFLL
HHHHHHHHCCEEEEECCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHH
KLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCGYWKVYNNIQKAKKQFTTYDI
HHHHHHHHCCCCCCCEEECCCHHHHHHHHHCHHHCEEEEHHHHHHHHHHHHHHHHHHHCC
SRTNMILEVLEKELNV
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA