Definition | Clostridium botulinum B1 str. Okra, complete genome. |
---|---|
Accession | NC_010516 |
Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170757097
Identifier: 170757097
GI number: 170757097
Start: 3624972
End: 3625106
Strand: Reverse
Name: 170757097
Synonym: CLD_1183
Alternate gene names: NA
Gene position: 3625106-3624972 (Counterclockwise)
Preceding gene: 170754655
Following gene: 170756182
Centisome position: 91.58
GC content: 37.04
Gene sequence:
>135_bases ATGGCCGAAGGAAAAGGTTTGGCAAAAGTTTTTTCTGGCTTTGCACAAAATATGTGTAGGGCTGTCACTTGGAAAAGTGG AGAGCTGCATAGGTACACGGAAGTTGCATATTATTTATTTGTATTATTGAAATAA
Upstream 100 bases:
>100_bases TAGTAAAAATTTAATTAAATGAAAGCTACTTATGGAGAGGTGCTGTAATTAATAGTATTTATTCTTAGTCGGCAGACTTT GAAGAATAAAAAAAGGAATT
Downstream 100 bases:
>100_bases TGCAGCAAAGGTGTTCCTTTGTTGCATTATTTTTTATTTTTATAAAATACATAAGTTAGAGTATTTATTAAATTTTAGAG AAACATTTAAAATATTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 43
Protein sequence:
>44_residues MAEGKGLAKVFSGFAQNMCRAVTWKSGELHRYTEVAYYLFVLLK
Sequences:
>Translated_44_residues MAEGKGLAKVFSGFAQNMCRAVTWKSGELHRYTEVAYYLFVLLK >Mature_43_residues AEGKGLAKVFSGFAQNMCRAVTWKSGELHRYTEVAYYLFVLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5015; Mature: 4884
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGKGLAKVFSGFAQNMCRAVTWKSGELHRYTEVAYYLFVLLK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AEGKGLAKVFSGFAQNMCRAVTWKSGELHRYTEVAYYLFVLLK CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA