Definition | Clostridium botulinum B1 str. Okra, complete genome. |
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Accession | NC_010516 |
Length | 3,958,233 |
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The map label for this gene is 170756650
Identifier: 170756650
GI number: 170756650
Start: 3646801
End: 3647886
Strand: Reverse
Name: 170756650
Synonym: CLD_1166
Alternate gene names: NA
Gene position: 3647886-3646801 (Counterclockwise)
Preceding gene: 170757484
Following gene: 170756376
Centisome position: 92.16
GC content: 27.99
Gene sequence:
>1086_bases ATGAAAAAATTAGGGATATCTGTATATCCATCAAACTCAGATAGTGAAGAAATAAAAGAGTATATAGAGCTTGCAGCAAA GTATGGATTTAAAAGAATTTTTACATGTTTAATATCTTCAGAAGAAATGAAGGTAGATCAGTTGATTAGTAAGTTTAAAG ATATAGTTCAATTTGCAAATAAAAAAGGAATGGAAGTTGTAGGAGATGTTGAGCCAGGGGTATTTAAAAGGCTTAGAACT TCTTATTCAGATTTATCTATTTTTAATGATATAGGATTCTATGGCATAAGATTAGATTTAGGATTTAGTGGGGTTGAAGA GTCCATAATGTCTTTTAATAAATACGGGATAAAAATAGAACTCAATATGAGTAATGGTACAAAGTATATAGACAATATTC TAACATATAAGCCTGATTTAGAAAATATATTAGGTTGTCATAATTTTTATCCACACAAATATACTGGATTAAATTATAAT CATTTCCTAAAGTGCAGTAAACAATTTAAGGATTTGGGAATAAGAACGGCGGCATTTATAAGTTCAAAAGAAGCAAAATA TGGACCATGGCCTGTATCAGAAGGATTAAGTACATTAGAAATGCATAGAGAATTACCTATAGAAGTTCAAGCTAAACATT TATTTGCTACAGGATTTATAGATGATGTTATTATTGCTAATGCATTTGCTTCAGAGGAAGAACTTAAAGTATTAAGTAGA ATTAACAAAAATATGTTAGAATTTAAAGTTAATCTTGTAGACGAAATTCCAGAACTTGAAAAAAGAATAATTCTTGATGA ATTTCATTTTAATAGAGGAGATGTATCTGATTACTTGGTAAGATCTACTCAAAGTAGAGTTAAATACAAAGATCATAATT TTAGAGCTTTTAATACTATAGACATTAAAAGAGGAGATGTTTTGATAGAATCTTCATTGTATAAAAGATATGCAGGAGAA TTACAAATTGCACTTAAGGATATGAAAAATTCAGGTAAAACTAATGTTGTTGGAAGAATAGCAGATGAAGAAATATTCCT TATTAATTATTTGCAGCCTTGGGAAAAGTTTGGATTTACTATATAA
Upstream 100 bases:
>100_bases GAGTTTTATAATAAAGATGAAAAATTAGGAATAGTAGTTATTACTAACTTTTTAAAAATATAAGAGCGTATAACCCATAA TAAAATTTGGAGGGAATTAT
Downstream 100 bases:
>100_bases TGTGTAATATTATATAAAGTATTATTTTATATATTTAAAACTTATTTATGTTTATAGTAAATATTATATTTATAGTTGAT TTGTAATCTGAAAAATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Surface Protein
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MKKLGISVYPSNSDSEEIKEYIELAAKYGFKRIFTCLISSEEMKVDQLISKFKDIVQFANKKGMEVVGDVEPGVFKRLRT SYSDLSIFNDIGFYGIRLDLGFSGVEESIMSFNKYGIKIELNMSNGTKYIDNILTYKPDLENILGCHNFYPHKYTGLNYN HFLKCSKQFKDLGIRTAAFISSKEAKYGPWPVSEGLSTLEMHRELPIEVQAKHLFATGFIDDVIIANAFASEEELKVLSR INKNMLEFKVNLVDEIPELEKRIILDEFHFNRGDVSDYLVRSTQSRVKYKDHNFRAFNTIDIKRGDVLIESSLYKRYAGE LQIALKDMKNSGKTNVVGRIADEEIFLINYLQPWEKFGFTI
Sequences:
>Translated_361_residues MKKLGISVYPSNSDSEEIKEYIELAAKYGFKRIFTCLISSEEMKVDQLISKFKDIVQFANKKGMEVVGDVEPGVFKRLRT SYSDLSIFNDIGFYGIRLDLGFSGVEESIMSFNKYGIKIELNMSNGTKYIDNILTYKPDLENILGCHNFYPHKYTGLNYN HFLKCSKQFKDLGIRTAAFISSKEAKYGPWPVSEGLSTLEMHRELPIEVQAKHLFATGFIDDVIIANAFASEEELKVLSR INKNMLEFKVNLVDEIPELEKRIILDEFHFNRGDVSDYLVRSTQSRVKYKDHNFRAFNTIDIKRGDVLIESSLYKRYAGE LQIALKDMKNSGKTNVVGRIADEEIFLINYLQPWEKFGFTI >Mature_361_residues MKKLGISVYPSNSDSEEIKEYIELAAKYGFKRIFTCLISSEEMKVDQLISKFKDIVQFANKKGMEVVGDVEPGVFKRLRT SYSDLSIFNDIGFYGIRLDLGFSGVEESIMSFNKYGIKIELNMSNGTKYIDNILTYKPDLENILGCHNFYPHKYTGLNYN HFLKCSKQFKDLGIRTAAFISSKEAKYGPWPVSEGLSTLEMHRELPIEVQAKHLFATGFIDDVIIANAFASEEELKVLSR INKNMLEFKVNLVDEIPELEKRIILDEFHFNRGDVSDYLVRSTQSRVKYKDHNFRAFNTIDIKRGDVLIESSLYKRYAGE LQIALKDMKNSGKTNVVGRIADEEIFLINYLQPWEKFGFTI
Specific function: Unknown
COG id: COG3589
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41568; Mature: 41568
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLGISVYPSNSDSEEIKEYIELAAKYGFKRIFTCLISSEEMKVDQLISKFKDIVQFAN CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC KKGMEVVGDVEPGVFKRLRTSYSDLSIFNDIGFYGIRLDLGFSGVEESIMSFNKYGIKIE CCCCEEEECCCHHHHHHHHHCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCEEEE LNMSNGTKYIDNILTYKPDLENILGCHNFYPHKYTGLNYNHFLKCSKQFKDLGIRTAAFI EECCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH SSKEAKYGPWPVSEGLSTLEMHRELPIEVQAKHLFATGFIDDVIIANAFASEEELKVLSR CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH INKNMLEFKVNLVDEIPELEKRIILDEFHFNRGDVSDYLVRSTQSRVKYKDHNFRAFNTI HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEECCCCEEEEEEE DIKRGDVLIESSLYKRYAGELQIALKDMKNSGKTNVVGRIADEEIFLINYLQPWEKFGFT EEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCHHHHCCCC I C >Mature Secondary Structure MKKLGISVYPSNSDSEEIKEYIELAAKYGFKRIFTCLISSEEMKVDQLISKFKDIVQFAN CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC KKGMEVVGDVEPGVFKRLRTSYSDLSIFNDIGFYGIRLDLGFSGVEESIMSFNKYGIKIE CCCCEEEECCCHHHHHHHHHCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCEEEE LNMSNGTKYIDNILTYKPDLENILGCHNFYPHKYTGLNYNHFLKCSKQFKDLGIRTAAFI EECCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH SSKEAKYGPWPVSEGLSTLEMHRELPIEVQAKHLFATGFIDDVIIANAFASEEELKVLSR CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH INKNMLEFKVNLVDEIPELEKRIILDEFHFNRGDVSDYLVRSTQSRVKYKDHNFRAFNTI HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEECCCCEEEEEEE DIKRGDVLIESSLYKRYAGELQIALKDMKNSGKTNVVGRIADEEIFLINYLQPWEKFGFT EEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCHHHHCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA