Definition | Clostridium botulinum B1 str. Okra, complete genome. |
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Accession | NC_010516 |
Length | 3,958,233 |
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The map label for this gene is 170756376
Identifier: 170756376
GI number: 170756376
Start: 3645439
End: 3646434
Strand: Reverse
Name: 170756376
Synonym: CLD_1167
Alternate gene names: NA
Gene position: 3646434-3645439 (Counterclockwise)
Preceding gene: 170756650
Following gene: 170755859
Centisome position: 92.12
GC content: 40.86
Gene sequence:
>996_bases ATGTATAATAATAATCCATTTTTTTATTTTCCTTATGGTATGCAGCAATTTACTTGTCCATTTTTAAATGAACAGATGAG GAGTGTTAATGACTTTCAAGATTATAATGAGACTGAAGAAGATTATTATAATGATGCTAGATCTTTAAATAGGCAGGCAA ACATAATTTCCCCTCCTATAGCAAGTGGCAGATGGAGTCGTTGGGAAAATCTTGGAGGAGTTTTAACCTCTGCGCCAGCA GTATCTTCCTGGGCACCTAACAGGTTAGATACTTTTGTAAAGGGAACAGATGATGCTCTTTGGCATAAATGGTGGAATGG TTCTCGTTGGAGTGAATGGGAAAGTCTTGGAGGAAGATTAACTTCTGCTCCTGGCGCTGTATCTTGGGGAAATAATAGAA TAGATGTATTTGCTAGAGGTACAGATAATGCTATGTGGCATATATGGTGGAATGGATCCAGATGGAGTGAATGGGAAAGC CTTGGAGGAGTTTTAACATCTTCACCAGCCGCATCTTCCTGGGCACCTAATAGAATAGATACTTTTGTAAGAGGAACAGA CAATGCCCTTTGGCATAAATGGTGGAATGGTTCTCGATGGAGTGAGTGGGAAAGTCTTGGAGGAAGATTAAACTCTTCAC CGGCAGCTGTGTCTTGGGGAAATAATAGAATTGATGTATTTGCACGTGGCCAAGGTAATCGTCTTTATCATTTATGGTGG AATGGATCTCGTTGGAGTAGATGGGAAGACCTCGGAGGAAGATTAACTTCCAGTCCCGCTGTTTCTTCTAGAAGACCTAA TAGATTGGAGGTATTTGCTAGGGGATCGAACAATCAATTGATGACCATGTCTTGGAACGGATCTCGTTGGAGTAACTGGT CAAGGATTGGAGGAAATATAACATCTGATCCAGCTGCAGTATCCTGGGGCCCAAATAGAACGGATGTATTTGCTAGAGGC AGAAATAATGCAATGTGGCATATCTATAGAAATTAG
Upstream 100 bases:
>100_bases TAAAAATGATGATTAATTAAATTGTAACAGGTTTTACTTTTACTCATAAAATATAATTGATGACTGTTTAGGCAGGAACA AGAATGCAAGGAGGTTCCTA
Downstream 100 bases:
>100_bases CTACAAAATATTAGAGTATTATTAACAGTAATAGTTTTATCCGGTGAAAAATTATATTTATGTATCCTATTTTTATAGTT TATAGAAAAATAAAAAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MYNNNPFFYFPYGMQQFTCPFLNEQMRSVNDFQDYNETEEDYYNDARSLNRQANIISPPIASGRWSRWENLGGVLTSAPA VSSWAPNRLDTFVKGTDDALWHKWWNGSRWSEWESLGGRLTSAPGAVSWGNNRIDVFARGTDNAMWHIWWNGSRWSEWES LGGVLTSSPAASSWAPNRIDTFVRGTDNALWHKWWNGSRWSEWESLGGRLNSSPAAVSWGNNRIDVFARGQGNRLYHLWW NGSRWSRWEDLGGRLTSSPAVSSRRPNRLEVFARGSNNQLMTMSWNGSRWSNWSRIGGNITSDPAAVSWGPNRTDVFARG RNNAMWHIYRN
Sequences:
>Translated_331_residues MYNNNPFFYFPYGMQQFTCPFLNEQMRSVNDFQDYNETEEDYYNDARSLNRQANIISPPIASGRWSRWENLGGVLTSAPA VSSWAPNRLDTFVKGTDDALWHKWWNGSRWSEWESLGGRLTSAPGAVSWGNNRIDVFARGTDNAMWHIWWNGSRWSEWES LGGVLTSSPAASSWAPNRIDTFVRGTDNALWHKWWNGSRWSEWESLGGRLNSSPAAVSWGNNRIDVFARGQGNRLYHLWW NGSRWSRWEDLGGRLTSSPAVSSRRPNRLEVFARGSNNQLMTMSWNGSRWSNWSRIGGNITSDPAAVSWGPNRTDVFARG RNNAMWHIYRN >Mature_331_residues MYNNNPFFYFPYGMQQFTCPFLNEQMRSVNDFQDYNETEEDYYNDARSLNRQANIISPPIASGRWSRWENLGGVLTSAPA VSSWAPNRLDTFVKGTDDALWHKWWNGSRWSEWESLGGRLTSAPGAVSWGNNRIDVFARGTDNAMWHIWWNGSRWSEWES LGGVLTSSPAASSWAPNRIDTFVRGTDNALWHKWWNGSRWSEWESLGGRLNSSPAAVSWGNNRIDVFARGQGNRLYHLWW NGSRWSRWEDLGGRLTSSPAVSSRRPNRLEVFARGSNNQLMTMSWNGSRWSNWSRIGGNITSDPAAVSWGPNRTDVFARG RNNAMWHIYRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.18
Molecular weight: Translated: 38146; Mature: 38146
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNNNPFFYFPYGMQQFTCPFLNEQMRSVNDFQDYNETEEDYYNDARSLNRQANIISPPI CCCCCCEEEECCCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC ASGRWSRWENLGGVLTSAPAVSSWAPNRLDTFVKGTDDALWHKWWNGSRWSEWESLGGRL CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCHHHHHHCCEE TSAPGAVSWGNNRIDVFARGTDNAMWHIWWNGSRWSEWESLGGVLTSSPAASSWAPNRID ECCCCCEECCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHCCEEECCCCCCCCCCCHHH TFVRGTDNALWHKWWNGSRWSEWESLGGRLNSSPAAVSWGNNRIDVFARGQGNRLYHLWW HHEECCCCCCEECCCCCCCCHHHHHHCCCCCCCCCEEECCCCEEEEEEECCCCEEEEEEE NGSRWSRWEDLGGRLTSSPAVSSRRPNRLEVFARGSNNQLMTMSWNGSRWSNWSRIGGNI CCCCCCHHHHHCCEECCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHCCCCC TSDPAAVSWGPNRTDVFARGRNNAMWHIYRN CCCCCEEECCCCCCEEEEECCCCEEEEEEEC >Mature Secondary Structure MYNNNPFFYFPYGMQQFTCPFLNEQMRSVNDFQDYNETEEDYYNDARSLNRQANIISPPI CCCCCCEEEECCCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC ASGRWSRWENLGGVLTSAPAVSSWAPNRLDTFVKGTDDALWHKWWNGSRWSEWESLGGRL CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCHHHHHHCCEE TSAPGAVSWGNNRIDVFARGTDNAMWHIWWNGSRWSEWESLGGVLTSSPAASSWAPNRID ECCCCCEECCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHCCEEECCCCCCCCCCCHHH TFVRGTDNALWHKWWNGSRWSEWESLGGRLNSSPAAVSWGNNRIDVFARGQGNRLYHLWW HHEECCCCCCEECCCCCCCCHHHHHHCCCCCCCCCEEECCCCEEEEEEECCCCEEEEEEE NGSRWSRWEDLGGRLTSSPAVSSRRPNRLEVFARGSNNQLMTMSWNGSRWSNWSRIGGNI CCCCCCHHHHHCCEECCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHCCCCC TSDPAAVSWGPNRTDVFARGRNNAMWHIYRN CCCCCEEECCCCCCEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA