| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756571
Identifier: 170756571
GI number: 170756571
Start: 1160588
End: 1161274
Strand: Reverse
Name: 170756571
Synonym: CLD_3514
Alternate gene names: NA
Gene position: 1161274-1160588 (Counterclockwise)
Preceding gene: 170756037
Following gene: 170757656
Centisome position: 29.34
GC content: 28.68
Gene sequence:
>687_bases TTGAATAAAACAATTAGAGAACAAATTTTTCAATTAGCAGATGAAGATTATCAAAAGTTTTCATCGAAACTTTTACCTAC TACAAATAATATTTTAGGAGTTAGATTACCTCAACTTCGCAAACTAGCAAAAGTAATTGCAAAGGAGGATTGGCGTAAAT TCCTAGTCAACTCTGATGTTAAATATTTCGAAGAAATTATGCTTCAAGGACTGGTGTTAGGTTATGCAAAAGCAGACATT GAAGAAATTCTTAAATATGTTGCTGACTTTGTACCCAAAATAGATAACTGGTCTGTATGTGATAGCTTTTGTACTGGTTT GAAATTTACTAAAGATAACATGGACCGTGTTTGGAATTTTATACAACCATTTTTATATTCTAATAAAGAATTTGAAGTTC GCTTTGGTGTTGTAATGCTGCTAGATTTTTACATTAATGATGAGTACATAGATCATGTAATTAAATCCCTAGATACTATA AAACATCCTGGCTATTATGCAAAAATGGCAGTTGCTTGGACAATTTCTATATGTTATATAAAGTTTCCAAAACAAACTAT GGAGTATTTGAAAAACAATACCTTAGATAACTTCACTTATAACAAAGCACTACAAAAAATTACTGAATCTTTACGAATAG ATAAAGAAACAAAAACAATTATTAAAAGTATGAAAAGAAAACTATAA
Upstream 100 bases:
>100_bases ATTCAAGTCAAGATATGATAATTGCCGAAGCAGTCTATATCAAGAATGTTAAAAAGTAATAGAGCAATACGAATTTAAAT TTTTAAAAAGGAGCAGAGCT
Downstream 100 bases:
>100_bases CTTAATATTTGTTGCATCAAAACTAGACCATAAAATTAAGAGGAAGTCTCAAAATAAATCTAATTTTGAAACTCCCTCTT AAATATGCTTTTATTTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNKTIREQIFQLADEDYQKFSSKLLPTTNNILGVRLPQLRKLAKVIAKEDWRKFLVNSDVKYFEEIMLQGLVLGYAKADI EEILKYVADFVPKIDNWSVCDSFCTGLKFTKDNMDRVWNFIQPFLYSNKEFEVRFGVVMLLDFYINDEYIDHVIKSLDTI KHPGYYAKMAVAWTISICYIKFPKQTMEYLKNNTLDNFTYNKALQKITESLRIDKETKTIIKSMKRKL
Sequences:
>Translated_228_residues MNKTIREQIFQLADEDYQKFSSKLLPTTNNILGVRLPQLRKLAKVIAKEDWRKFLVNSDVKYFEEIMLQGLVLGYAKADI EEILKYVADFVPKIDNWSVCDSFCTGLKFTKDNMDRVWNFIQPFLYSNKEFEVRFGVVMLLDFYINDEYIDHVIKSLDTI KHPGYYAKMAVAWTISICYIKFPKQTMEYLKNNTLDNFTYNKALQKITESLRIDKETKTIIKSMKRKL >Mature_228_residues MNKTIREQIFQLADEDYQKFSSKLLPTTNNILGVRLPQLRKLAKVIAKEDWRKFLVNSDVKYFEEIMLQGLVLGYAKADI EEILKYVADFVPKIDNWSVCDSFCTGLKFTKDNMDRVWNFIQPFLYSNKEFEVRFGVVMLLDFYINDEYIDHVIKSLDTI KHPGYYAKMAVAWTISICYIKFPKQTMEYLKNNTLDNFTYNKALQKITESLRIDKETKTIIKSMKRKL
Specific function: Unknown
COG id: COG4912
COG function: function code L; Predicted DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26984; Mature: 26984
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTIREQIFQLADEDYQKFSSKLLPTTNNILGVRLPQLRKLAKVIAKEDWRKFLVNSDV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH KYFEEIMLQGLVLGYAKADIEEILKYVADFVPKIDNWSVCDSFCTGLKFTKDNMDRVWNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHH IQPFLYSNKEFEVRFGVVMLLDFYINDEYIDHVIKSLDTIKHPGYYAKMAVAWTISICYI HHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHE KFPKQTMEYLKNNTLDNFTYNKALQKITESLRIDKETKTIIKSMKRKL ECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNKTIREQIFQLADEDYQKFSSKLLPTTNNILGVRLPQLRKLAKVIAKEDWRKFLVNSDV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH KYFEEIMLQGLVLGYAKADIEEILKYVADFVPKIDNWSVCDSFCTGLKFTKDNMDRVWNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHH IQPFLYSNKEFEVRFGVVMLLDFYINDEYIDHVIKSLDTIKHPGYYAKMAVAWTISICYI HHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHE KFPKQTMEYLKNNTLDNFTYNKALQKITESLRIDKETKTIIKSMKRKL ECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA