| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756360
Identifier: 170756360
GI number: 170756360
Start: 985573
End: 986379
Strand: Reverse
Name: 170756360
Synonym: CLD_3690
Alternate gene names: NA
Gene position: 986379-985573 (Counterclockwise)
Preceding gene: 170754316
Following gene: 170757385
Centisome position: 24.92
GC content: 34.08
Gene sequence:
>807_bases ATGAAAGAAAAGATCACTGAAATGATACGAAACTTTGTTAAGGAATACGAGCAAAAGGATGATATTTCAACCAAATGGGA TGAGCCTTTAGTGGGGTTTGCTGATGCTAATCATCCTTACATTTTAGATTTGAAAGAACTTATTACACAAACTCATAAAT TACCTACTGATGTACTTTCCGATGCATCTATTGTAATAGCGTATTTTATTCCATTTACTAAAGAATTGGCTAATACAAAT CGAATTGCTGGAGATATTTCCTCTCCTGAGTGGGCACTGGCTTATGAAGAAACCAATGCAATGTTTGTTAAGCTGAATGA ATATATAATATCAGAACTACGCAAAATAGGATATCATGCAGGTATTTCACCAGAAGCTTCTACCTTTGACCAAAAGATAT TAAAAAGCAATTGGTCTCATCGACATTTTGCAAAAGTTGCTGGTCTTGGAACCTTTGGTATCAATAATATGCTTATAACT AAGATTGGATGCTGTGGAAGATATAGCACCATTGTAACCAATCTAGATGTTAAACCGGATTCACCTTTAGAAGATGAATT TTGCTTATATAAAAAGAATAAAAGCTGCGGTATATGTGTAAAACATTGTCCATCAGGTGCATTGACTTTAGATGGATATG ATAGACATAAGTGTTATGTCGTACTAAGAAAAAATGCAGAATTATATACAGAATTCGGAAGCTCTTACACCAATAAATCT GGTGATCATCCAAACAGTGTAGGTAGTGAAGTATGTGGAAAGTGCGTAGTAAATACACCATGTACCTTTTTTTACAGAAA ACCTTGA
Upstream 100 bases:
>100_bases ACTCTTAGAATTAATAATATATTGATAAAAGATATCTATTAGAAAAATATAATAATTTTTTAATCCAACAGATTTATAAA AAGAAAGGATATGCTTTAGT
Downstream 100 bases:
>100_bases TTATAATTTAGAAAAATTAACTATACATGTCATATTTAAATATCTGTTATATTCCACTTTCCACCGATAACTGAAACATA TATTCGTAAGGTGCTTATTT
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKEKITEMIRNFVKEYEQKDDISTKWDEPLVGFADANHPYILDLKELITQTHKLPTDVLSDASIVIAYFIPFTKELANTN RIAGDISSPEWALAYEETNAMFVKLNEYIISELRKIGYHAGISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLIT KIGCCGRYSTIVTNLDVKPDSPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVLRKNAELYTEFGSSYTNKS GDHPNSVGSEVCGKCVVNTPCTFFYRKP
Sequences:
>Translated_268_residues MKEKITEMIRNFVKEYEQKDDISTKWDEPLVGFADANHPYILDLKELITQTHKLPTDVLSDASIVIAYFIPFTKELANTN RIAGDISSPEWALAYEETNAMFVKLNEYIISELRKIGYHAGISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLIT KIGCCGRYSTIVTNLDVKPDSPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVLRKNAELYTEFGSSYTNKS GDHPNSVGSEVCGKCVVNTPCTFFYRKP >Mature_268_residues MKEKITEMIRNFVKEYEQKDDISTKWDEPLVGFADANHPYILDLKELITQTHKLPTDVLSDASIVIAYFIPFTKELANTN RIAGDISSPEWALAYEETNAMFVKLNEYIISELRKIGYHAGISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLIT KIGCCGRYSTIVTNLDVKPDSPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVLRKNAELYTEFGSSYTNKS GDHPNSVGSEVCGKCVVNTPCTFFYRKP
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30222; Mature: 30222
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKITEMIRNFVKEYEQKDDISTKWDEPLVGFADANHPYILDLKELITQTHKLPTDVLS CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCHHHHC DASIVIAYFIPFTKELANTNRIAGDISSPEWALAYEETNAMFVKLNEYIISELRKIGYHA CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHCC GISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLITKIGCCGRYSTIVTNLDVKPD CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHEEEECCCCCC SPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVLRKNAELYTEFGSSYTNKS CCCCCCEEEEECCCCCCEEEEECCCCCEEECCCCCCEEEEEEECCCHHHHHHCCCCCCCC GDHPNSVGSEVCGKCVVNTPCTFFYRKP CCCCCHHHHHHHCCEEECCCCEEEEECC >Mature Secondary Structure MKEKITEMIRNFVKEYEQKDDISTKWDEPLVGFADANHPYILDLKELITQTHKLPTDVLS CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCHHHHC DASIVIAYFIPFTKELANTNRIAGDISSPEWALAYEETNAMFVKLNEYIISELRKIGYHA CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHCC GISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLITKIGCCGRYSTIVTNLDVKPD CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHEEEECCCCCC SPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVLRKNAELYTEFGSSYTNKS CCCCCCEEEEECCCCCCEEEEECCCCCEEECCCCCCEEEEEEECCCHHHHHHCCCCCCCC GDHPNSVGSEVCGKCVVNTPCTFFYRKP CCCCCHHHHHHHCCEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA