| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757385
Identifier: 170757385
GI number: 170757385
Start: 984813
End: 985331
Strand: Reverse
Name: 170757385
Synonym: CLD_3691
Alternate gene names: NA
Gene position: 985331-984813 (Counterclockwise)
Preceding gene: 170756360
Following gene: 170755594
Centisome position: 24.89
GC content: 32.56
Gene sequence:
>519_bases GTGAACTTTATAGACTTAGCTAAAGAAAGATATTCTGTAAGAAATTTTGATACCAAAAAGATTGAACAAGAAAAACTAGA TTTAATTTTAAAAGCAGGACAATTAGCTCCAACTGCTGTAAATTATCAACCTCAAAGAATTTTAGTAATTGAAAGTACTG AGGCTCTTGAAAAACTAAAAACTTGTACAATTTATCACTTCAATGCACCTATGGCTTTACTTATATGCGCGGATAAAAAT GAAGCCTGGAAACGCAGTTATGATGGGAAAAGCCATACTGATATTGATGGAAGTATTGTTGCTACACATATGATGCTACA AGCTGCTGAACTTGGCTTGGGTACAACATGGGTTGGTCATTTTGACCCAAATGCTATTCGTAATGCTTTTAATATACCAA CAAATCTTGAACCAATATGCCTTTTGCCAGTAGGTTATCCAAATAAGGATGCAAAACCAAATCCTAATCACCAAAAAAGA AAAAATATTTCCCAAACTGTTTTCTATAATCATTTTTAA
Upstream 100 bases:
>100_bases GGTAAGTATGCTACAAAAAAGTGCATACTTCTTTTTCTGTTTTGTAATTATTATAATAAAAAGAGACAGTAAAATAAATA TATAGAATGGGGATGTTTAT
Downstream 100 bases:
>100_bases AATTAAAATTCATTAAATGCTTACTATAAAAAAACAAGAGGCTGCCTCATAATAAAATATATTTTGAGACAGCTTCCTTA TAACCATGCTTCTCCCAAGA
Product: nitroreductase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNFIDLAKERYSVRNFDTKKIEQEKLDLILKAGQLAPTAVNYQPQRILVIESTEALEKLKTCTIYHFNAPMALLICADKN EAWKRSYDGKSHTDIDGSIVATHMMLQAAELGLGTTWVGHFDPNAIRNAFNIPTNLEPICLLPVGYPNKDAKPNPNHQKR KNISQTVFYNHF
Sequences:
>Translated_172_residues MNFIDLAKERYSVRNFDTKKIEQEKLDLILKAGQLAPTAVNYQPQRILVIESTEALEKLKTCTIYHFNAPMALLICADKN EAWKRSYDGKSHTDIDGSIVATHMMLQAAELGLGTTWVGHFDPNAIRNAFNIPTNLEPICLLPVGYPNKDAKPNPNHQKR KNISQTVFYNHF >Mature_172_residues MNFIDLAKERYSVRNFDTKKIEQEKLDLILKAGQLAPTAVNYQPQRILVIESTEALEKLKTCTIYHFNAPMALLICADKN EAWKRSYDGKSHTDIDGSIVATHMMLQAAELGLGTTWVGHFDPNAIRNAFNIPTNLEPICLLPVGYPNKDAKPNPNHQKR KNISQTVFYNHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 19528; Mature: 19528
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIDLAKERYSVRNFDTKKIEQEKLDLILKAGQLAPTAVNYQPQRILVIESTEALEKLK CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECHHHHHHHH TCTIYHFNAPMALLICADKNEAWKRSYDGKSHTDIDGSIVATHMMLQAAELGLGTTWVGH EEEEEEECCCEEEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC FDPNAIRNAFNIPTNLEPICLLPVGYPNKDAKPNPNHQKRKNISQTVFYNHF CCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEECCC >Mature Secondary Structure MNFIDLAKERYSVRNFDTKKIEQEKLDLILKAGQLAPTAVNYQPQRILVIESTEALEKLK CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECHHHHHHHH TCTIYHFNAPMALLICADKNEAWKRSYDGKSHTDIDGSIVATHMMLQAAELGLGTTWVGH EEEEEEECCCEEEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC FDPNAIRNAFNIPTNLEPICLLPVGYPNKDAKPNPNHQKRKNISQTVFYNHF CCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]