Definition | Clostridium botulinum B1 str. Okra, complete genome. |
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Accession | NC_010516 |
Length | 3,958,233 |
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The map label for this gene is malX [H]
Identifier: 170756179
GI number: 170756179
Start: 344496
End: 346019
Strand: Direct
Name: malX [H]
Synonym: CLD_0484
Alternate gene names: 170756179
Gene position: 344496-346019 (Clockwise)
Preceding gene: 170756992
Following gene: 170756522
Centisome position: 8.7
GC content: 31.17
Gene sequence:
>1524_bases ATGAGCAAAAAAAATAAAATAATGGATTTCTTCTCTGCCTTAGGTAGAAGTTTAATGTTACCAATTGCTACTTTAGCTGC TGCAGGTTTAATATTAGGTCTAAGTTCTGCACTACTTAAACCACAAATTCAAGCAGCATTACCTTTTTTACAAAATTCAG TGGTTATATATGTTTTAACTTTAATTAAAACGATTACTGCTACAGTTTTTGGAATGATTCCAGTATTATTTGCTATATGT ATTGCTTTTGGATTAGCAAAAGAGGAAAAAGAGATTGCAGCATTTGCAGGATTCATTGGTTATTATACATTTTTATTAAG TGCATCAATTATTATTAATTCCGGAGCATTTAACTTTGCTTCACTTAAAATGTCAAATATTTTAGGCATTGAGAAAACTA TAGAAATGGGAGCTTTTGCAGGTATCCTTACAGGTATATTAACATCAATGCTTCATAATAAATTTTATAAAATTGACTTC CCTATAGCTATTGCCTTTTATGGCGGAAAGAGATTTGTAGCAATTGTGGTTATAGGAGCCATGACCCTTCTTGGACAAGT TATGCCATTTGTTTGGGTTCCAATTTCATCAGGAATAAATTCTTTAGGAAGTTTAATTGGAAGTTCAGGACATACAGGTG TATTTTTGTTTGGATTCTTAGAAAGAATTTTGATTCCTACTGGACTACACCATGTTTTAAATGGTGTATTTCGTACAACA TCTGTAGGTGGAGTATATCAAGGCGTAGAAGGATGTTTAAACATATTCCTTCAATTCTTTGATAAGGTAGATATTTCTCA ATTAAAACAATTTACAGCCTTCTTAGGGCAAGGTAAAATGCCCTTTATGATGTTTGGACTTCCAGCAGCAGCCTATGCTA TATATAAGACATCCCCTGATAATAAGAAGCCTAAAGTAAAGGCTCTAATGGTTGCAGGAGTTGCTGCATCTATTGTATCA GGTATTACAGAACCATTAGAATTCTCATTTATGTTTATTGCTCCACAACTATTCTTATTTCATGCTATAATGGGAGGTAT TTCTTTTGGTATATTAAGTTTACTAGGCGTTGCAATTGGAAATACTGGTGGAGGAATTATTGATTTCTTGATTTATGGAG TTTTAGTACCTGGATCAAGATGGTATATTGTAATATTAGTAGGTATAGTATTTGCAGTTATTTATTATATGGTATTTAAG TGGTATTTCACAAATAAGAATATTTCTATTGATGTAAATGAAGATGTTGAAGAAGAAGATTCTTCTAAATCTTCTTCCGG GAAAACTAATTTAGCTGTCAAAATTATTAATGGATTAGGTGGAATTGATAATATAGTAGCAGTTAACAATTGTATATCAA GACTTAGAGTAGATATTAAAGATATGTCATTAGTAAATGAAGATTTATTAAAGAAAACTGGCAGTATGGGAATTGTGAAA CCTTCTTCAACTCATATACATGTTATTTATGGACCTAAAGTTGAAAAAGTAGCAAAGCAAGTAAAAGAAGCTATGAAATA TTAA
Upstream 100 bases:
>100_bases TTATATTCAGAATTTTTGGAAAAATCTGTGTATTAGTAGAATTTGAAGAGCTTTAGAATATTGAAATATCACAAATGTTT AATTAAAAAGGAGAATGTGT
Downstream 100 bases:
>100_bases ATTATATAAATATAAAAATAGCAACTTAAAATGTTGCTATTTTTATAAAACTAATGAGAAACAATATTCATACGTGACAT ATATAATTCCACAATTATTT
Product: PTS system, maltose/glucose-specfic, IIBC component
Products: NA
Alternate protein names: Maltose and glucose permease IIC component; PTS system maltose- and glucose-specific EIIC component; Maltose- and glucose-specific phosphotransferase enzyme IIB component; PTS system maltose- and glucose-specific EIIB component [H]
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MSKKNKIMDFFSALGRSLMLPIATLAAAGLILGLSSALLKPQIQAALPFLQNSVVIYVLTLIKTITATVFGMIPVLFAIC IAFGLAKEEKEIAAFAGFIGYYTFLLSASIIINSGAFNFASLKMSNILGIEKTIEMGAFAGILTGILTSMLHNKFYKIDF PIAIAFYGGKRFVAIVVIGAMTLLGQVMPFVWVPISSGINSLGSLIGSSGHTGVFLFGFLERILIPTGLHHVLNGVFRTT SVGGVYQGVEGCLNIFLQFFDKVDISQLKQFTAFLGQGKMPFMMFGLPAAAYAIYKTSPDNKKPKVKALMVAGVAASIVS GITEPLEFSFMFIAPQLFLFHAIMGGISFGILSLLGVAIGNTGGGIIDFLIYGVLVPGSRWYIVILVGIVFAVIYYMVFK WYFTNKNISIDVNEDVEEEDSSKSSSGKTNLAVKIINGLGGIDNIVAVNNCISRLRVDIKDMSLVNEDLLKKTGSMGIVK PSSTHIHVIYGPKVEKVAKQVKEAMKY
Sequences:
>Translated_507_residues MSKKNKIMDFFSALGRSLMLPIATLAAAGLILGLSSALLKPQIQAALPFLQNSVVIYVLTLIKTITATVFGMIPVLFAIC IAFGLAKEEKEIAAFAGFIGYYTFLLSASIIINSGAFNFASLKMSNILGIEKTIEMGAFAGILTGILTSMLHNKFYKIDF PIAIAFYGGKRFVAIVVIGAMTLLGQVMPFVWVPISSGINSLGSLIGSSGHTGVFLFGFLERILIPTGLHHVLNGVFRTT SVGGVYQGVEGCLNIFLQFFDKVDISQLKQFTAFLGQGKMPFMMFGLPAAAYAIYKTSPDNKKPKVKALMVAGVAASIVS GITEPLEFSFMFIAPQLFLFHAIMGGISFGILSLLGVAIGNTGGGIIDFLIYGVLVPGSRWYIVILVGIVFAVIYYMVFK WYFTNKNISIDVNEDVEEEDSSKSSSGKTNLAVKIINGLGGIDNIVAVNNCISRLRVDIKDMSLVNEDLLKKTGSMGIVK PSSTHIHVIYGPKVEKVAKQVKEAMKY >Mature_506_residues SKKNKIMDFFSALGRSLMLPIATLAAAGLILGLSSALLKPQIQAALPFLQNSVVIYVLTLIKTITATVFGMIPVLFAICI AFGLAKEEKEIAAFAGFIGYYTFLLSASIIINSGAFNFASLKMSNILGIEKTIEMGAFAGILTGILTSMLHNKFYKIDFP IAIAFYGGKRFVAIVVIGAMTLLGQVMPFVWVPISSGINSLGSLIGSSGHTGVFLFGFLERILIPTGLHHVLNGVFRTTS VGGVYQGVEGCLNIFLQFFDKVDISQLKQFTAFLGQGKMPFMMFGLPAAAYAIYKTSPDNKKPKVKALMVAGVAASIVSG ITEPLEFSFMFIAPQLFLFHAIMGGISFGILSLLGVAIGNTGGGIIDFLIYGVLVPGSRWYIVILVGIVFAVIYYMVFKW YFTNKNISIDVNEDVEEEDSSKSSSGKTNLAVKIINGLGGIDNIVAVNNCISRLRVDIKDMSLVNEDLLKKTGSMGIVKP SSTHIHVIYGPKVEKVAKQVKEAMKY
Specific function: MalX encodes a phosphotransferase system enzyme II that can recognize glucose and maltose as substrates even though these sugars may not represent the natural substrates of the system [H]
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787908, Length=522, Percent_Identity=39.6551724137931, Blast_Score=361, Evalue=1e-101, Organism=Escherichia coli, GI1787343, Length=507, Percent_Identity=31.3609467455621, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI1786894, Length=514, Percent_Identity=33.4630350194552, Blast_Score=230, Evalue=2e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011301 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 54704; Mature: 54573
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKNKIMDFFSALGRSLMLPIATLAAAGLILGLSSALLKPQIQAALPFLQNSVVIYVLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHH LIKTITATVFGMIPVLFAICIAFGLAKEEKEIAAFAGFIGYYTFLLSASIIINSGAFNFA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHH SLKMSNILGIEKTIEMGAFAGILTGILTSMLHNKFYKIDFPIAIAFYGGKRFVAIVVIGA HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCHHHHHHHHHH MTLLGQVMPFVWVPISSGINSLGSLIGSSGHTGVFLFGFLERILIPTGLHHVLNGVFRTT HHHHHHHHHHEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC SVGGVYQGVEGCLNIFLQFFDKVDISQLKQFTAFLGQGKMPFMMFGLPAAAYAIYKTSPD CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHEEEECCCC NKKPKVKALMVAGVAASIVSGITEPLEFSFMFIAPQLFLFHAIMGGISFGILSLLGVAIG CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTGGGIIDFLIYGVLVPGSRWYIVILVGIVFAVIYYMVFKWYFTNKNISIDVNEDVEEED CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCCCHHC SSKSSSGKTNLAVKIINGLGGIDNIVAVNNCISRLRVDIKDMSLVNEDLLKKTGSMGIVK CCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC PSSTHIHVIYGPKVEKVAKQVKEAMKY CCCCEEEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure SKKNKIMDFFSALGRSLMLPIATLAAAGLILGLSSALLKPQIQAALPFLQNSVVIYVLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHH LIKTITATVFGMIPVLFAICIAFGLAKEEKEIAAFAGFIGYYTFLLSASIIINSGAFNFA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHH SLKMSNILGIEKTIEMGAFAGILTGILTSMLHNKFYKIDFPIAIAFYGGKRFVAIVVIGA HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCHHHHHHHHHH MTLLGQVMPFVWVPISSGINSLGSLIGSSGHTGVFLFGFLERILIPTGLHHVLNGVFRTT HHHHHHHHHHEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC SVGGVYQGVEGCLNIFLQFFDKVDISQLKQFTAFLGQGKMPFMMFGLPAAAYAIYKTSPD CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHEEEECCCC NKKPKVKALMVAGVAASIVSGITEPLEFSFMFIAPQLFLFHAIMGGISFGILSLLGVAIG CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTGGGIIDFLIYGVLVPGSRWYIVILVGIVFAVIYYMVFKWYFTNKNISIDVNEDVEEED CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCCCHHC SSKSSSGKTNLAVKIINGLGGIDNIVAVNNCISRLRVDIKDMSLVNEDLLKKTGSMGIVK CCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC PSSTHIHVIYGPKVEKVAKQVKEAMKY CCCCEEEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1856179; 9097039; 9278503; 2670898 [H]