| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756046
Identifier: 170756046
GI number: 170756046
Start: 950975
End: 951529
Strand: Reverse
Name: 170756046
Synonym: CLD_3733
Alternate gene names: NA
Gene position: 951529-950975 (Counterclockwise)
Preceding gene: 170756860
Following gene: 170757770
Centisome position: 24.04
GC content: 34.41
Gene sequence:
>555_bases TTGAAAAAGATTAAATTACAAAACAGACCTTTTGGCCCGTTTCCTACTATACTTGTAGGAGCAAATGTGAATGGAAAGCC TAATTATGTCACTGTAGGTGCATGCGGAGTAGTAAGCCTTAAGCCAGTGCTATATGTATCGCTTAAGGATAGTCACTACA CAACTTTAGGTATTAAGGAAAATGGTTATTTCAGTGTCAACATACCTTCTGCGGACTTGGTTCAAAAGACCGATTATTGT GGTATAGTATCGGGGCATAAAACAGACAAGTCTAATTTATTTACATCATTTTATGATGAACTTGGAAAAGCACCAATGGC TGAAGAATGCACGATGAATTTTCTATGTAAAGTTATCCAAACCATTCCTGTCTTTGATTTTCAAATGTTTTTAGGAGAAA TAGAAGCTGTATACATTAATGAGGAATGTATGACAGATGACAAACCTGACCCATTAAAGATTAACCCACTAATTATGATG GACTCAAATTATTATGATTTAGGCAAAGACGTAGGTACTTTATTTAAAACAGGTTTAGAAATACTACCTAAATAG
Upstream 100 bases:
>100_bases TATCATAACTCATTGAAAAGAAAAATCTATACTTTTTTGTGAATTACCATTATAATATTAATGCTGTTTATTATGCAAAT TAAGAAATGGAGGTGTCGAA
Downstream 100 bases:
>100_bases TTAAATAAGGACTATCCTCATAAGGTAGTCCTTTTGACTTTTATATTTGTTATCATATATGTGGATAATAATGTCACATT AAGAAAGTTGCAATATTCTT
Product: putative flavoredoxin
Products: NA
Alternate protein names: Flavin Reductase Domain-Containing Protein; Flavin Reductase Domain Protein; Flavoredoxin Flr; NADPH-Flavin Oxidoreductase; Flavin Reductase; Flavin Reductase-Like Protein; Flavin Reductase Like Domain Protein; Conserved /NTAB Family
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKKIKLQNRPFGPFPTILVGANVNGKPNYVTVGACGVVSLKPVLYVSLKDSHYTTLGIKENGYFSVNIPSADLVQKTDYC GIVSGHKTDKSNLFTSFYDELGKAPMAEECTMNFLCKVIQTIPVFDFQMFLGEIEAVYINEECMTDDKPDPLKINPLIMM DSNYYDLGKDVGTLFKTGLEILPK
Sequences:
>Translated_184_residues MKKIKLQNRPFGPFPTILVGANVNGKPNYVTVGACGVVSLKPVLYVSLKDSHYTTLGIKENGYFSVNIPSADLVQKTDYC GIVSGHKTDKSNLFTSFYDELGKAPMAEECTMNFLCKVIQTIPVFDFQMFLGEIEAVYINEECMTDDKPDPLKINPLIMM DSNYYDLGKDVGTLFKTGLEILPK >Mature_184_residues MKKIKLQNRPFGPFPTILVGANVNGKPNYVTVGACGVVSLKPVLYVSLKDSHYTTLGIKENGYFSVNIPSADLVQKTDYC GIVSGHKTDKSNLFTSFYDELGKAPMAEECTMNFLCKVIQTIPVFDFQMFLGEIEAVYINEECMTDDKPDPLKINPLIMM DSNYYDLGKDVGTLFKTGLEILPK
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20469; Mature: 20469
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKLQNRPFGPFPTILVGANVNGKPNYVTVGACGVVSLKPVLYVSLKDSHYTTLGIKE CCCEECCCCCCCCCCEEEEECCCCCCCCEEEEECCCCEEECEEEEEEECCCCEEEEEEEC NGYFSVNIPSADLVQKTDYCGIVSGHKTDKSNLFTSFYDELGKAPMAEECTMNFLCKVIQ CCEEEEECCCHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH TIPVFDFQMFLGEIEAVYINEECMTDDKPDPLKINPLIMMDSNYYDLGKDVGTLFKTGLE HCCCHHHHHHHCCEEEEEECHHHCCCCCCCCEEECEEEEECCCCHHHHHHHHHHHHHHHH ILPK HCCC >Mature Secondary Structure MKKIKLQNRPFGPFPTILVGANVNGKPNYVTVGACGVVSLKPVLYVSLKDSHYTTLGIKE CCCEECCCCCCCCCCEEEEECCCCCCCCEEEEECCCCEEECEEEEEEECCCCEEEEEEEC NGYFSVNIPSADLVQKTDYCGIVSGHKTDKSNLFTSFYDELGKAPMAEECTMNFLCKVIQ CCEEEEECCCHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH TIPVFDFQMFLGEIEAVYINEECMTDDKPDPLKINPLIMMDSNYYDLGKDVGTLFKTGLE HCCCHHHHHHHCCEEEEEECHHHCCCCCCCCEEECEEEEECCCCHHHHHHHHHHHHHHHH ILPK HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA