| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755514
Identifier: 170755514
GI number: 170755514
Start: 3689831
End: 3690439
Strand: Reverse
Name: 170755514
Synonym: CLD_1127
Alternate gene names: NA
Gene position: 3690439-3689831 (Counterclockwise)
Preceding gene: 170754541
Following gene: 170756327
Centisome position: 93.23
GC content: 28.74
Gene sequence:
>609_bases ATGAAAGGTAAAACACATGCGGGAGTAGGGATAGCGGTGTTTTTATCTATATATAGTAGATTGCCAGGAAACTTTAGTTA TTTAGGTTTGCTTGTGGTTTTTATATCCTCTTTACTTCCAGATATAGATCACCCAAAGAGTATATTTAATAAATATATAC TACTTTTTAAGAATAAGACTTCAAAAATAGCTTTTTATAGTTGTAGTGGTGTTTTAGTATTTTGGTATGACTATCTCTAT ACAAGAGAACCTGCCCTAAAGGCTTTAGCTATAATGTTAATAATAATAGCCATATCTTCTCATAGAAACGGTCTTACTCA TAGTTTATTTGGTATGATTATATTTGCATTTATAGCAGGTTATTTAGGAAATATGTACAATATACATTATATGGTATATT ATCTTTTTATTGGTTATGGTAGTCATATTTTATGCGACATGGCTACTAATAGAGGGGTGCCACTTTTGTATCCCTTTAGT AAGAAGAAATTTAAATTTCCTGTGACTTACAAGAGCAATTCTAAAATAGCCACATTAATAGAAACTATACTAACTACTTC GGTTTTAATATTTACAATATATAAATTACCAATAATTTTTCCCAAATAA
Upstream 100 bases:
>100_bases CAAATAAAGGGCAAAAAAGTGCAATTTAATGATATAATATAAGAAATAAAGAAAAGAATTAAATAAAAAAATTAAAATAT TTTATATAGAGGAGAATTTT
Downstream 100 bases:
>100_bases TAGGAGTGATTAAGTGTTTGATTTAGAATACCAATTAAAAAACCTGCCAGATAAACCTGGAGTATATTTAATGAAAAATA ATTTAGGGGAAATTATTTAT
Product: putative metal-dependent hydrolase, membrane-bound
Products: NA
Alternate protein names: Metal-Dependent Hydrolase Membrane-Bound; Metal-Dependent Membrane Hydrolase
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKGKTHAGVGIAVFLSIYSRLPGNFSYLGLLVVFISSLLPDIDHPKSIFNKYILLFKNKTSKIAFYSCSGVLVFWYDYLY TREPALKALAIMLIIIAISSHRNGLTHSLFGMIIFAFIAGYLGNMYNIHYMVYYLFIGYGSHILCDMATNRGVPLLYPFS KKKFKFPVTYKSNSKIATLIETILTTSVLIFTIYKLPIIFPK
Sequences:
>Translated_202_residues MKGKTHAGVGIAVFLSIYSRLPGNFSYLGLLVVFISSLLPDIDHPKSIFNKYILLFKNKTSKIAFYSCSGVLVFWYDYLY TREPALKALAIMLIIIAISSHRNGLTHSLFGMIIFAFIAGYLGNMYNIHYMVYYLFIGYGSHILCDMATNRGVPLLYPFS KKKFKFPVTYKSNSKIATLIETILTTSVLIFTIYKLPIIFPK >Mature_202_residues MKGKTHAGVGIAVFLSIYSRLPGNFSYLGLLVVFISSLLPDIDHPKSIFNKYILLFKNKTSKIAFYSCSGVLVFWYDYLY TREPALKALAIMLIIIAISSHRNGLTHSLFGMIIFAFIAGYLGNMYNIHYMVYYLFIGYGSHILCDMATNRGVPLLYPFS KKKFKFPVTYKSNSKIATLIETILTTSVLIFTIYKLPIIFPK
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22933; Mature: 22933
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKTHAGVGIAVFLSIYSRLPGNFSYLGLLVVFISSLLPDIDHPKSIFNKYILLFKNKT CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEECCC SKIAFYSCSGVLVFWYDYLYTREPALKALAIMLIIIAISSHRNGLTHSLFGMIIFAFIAG CEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YLGNMYNIHYMVYYLFIGYGSHILCDMATNRGVPLLYPFSKKKFKFPVTYKSNSKIATLI HHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCEEEEEEECCCCHHHHHH ETILTTSVLIFTIYKLPIIFPK HHHHHHHHHHHHHHHHCEECCC >Mature Secondary Structure MKGKTHAGVGIAVFLSIYSRLPGNFSYLGLLVVFISSLLPDIDHPKSIFNKYILLFKNKT CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEECCC SKIAFYSCSGVLVFWYDYLYTREPALKALAIMLIIIAISSHRNGLTHSLFGMIIFAFIAG CEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YLGNMYNIHYMVYYLFIGYGSHILCDMATNRGVPLLYPFSKKKFKFPVTYKSNSKIATLI HHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCEEEEEEECCCCHHHHHH ETILTTSVLIFTIYKLPIIFPK HHHHHHHHHHHHHHHHCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA