| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754919
Identifier: 170754919
GI number: 170754919
Start: 3694225
End: 3694662
Strand: Reverse
Name: 170754919
Synonym: CLD_1123
Alternate gene names: NA
Gene position: 3694662-3694225 (Counterclockwise)
Preceding gene: 170757626
Following gene: 170755973
Centisome position: 93.34
GC content: 26.03
Gene sequence:
>438_bases ATGGATTTAAGTAAACTAAGTTTAATTTTCAAAATAGTTATAATAGGTGTAGTATATATTATAATATTTTGGGCTTTAAA AATAATGTATAAAGATATGAAAGGCGGAAATAAAAAAAGAAGACCTACTGGTAGAAGAACCTTTGGTTTAGAAATAATAC ATGCTATAAATAAATCTGAATTAAGAAAAGGTGCTGTTATACCTATTAGAGGAGGTATAACTATAGGAAGAAAACCAGAT AATATATTAATATTAGATGACCCTTACGTTTCAGGACATCATGCAAAGATTTACAGTAAAAATACTCAGCATATAATAGA AGATTTAAATAGTACAAATGGAACTTTATTAAATAATAAAAATATTACAGGAAAAAATCAGTTATCACCGGGAGATTTAA TCAAAATAGGTGGTACGGTTTTTAAGGTAATAGGATAA
Upstream 100 bases:
>100_bases AATTTATTTGGGACTAGCATATAAACATATAGGTGCTAGTCCTTTAAATACAAATATTTTAGCATAATATACCAACAGGG AAGGTAAAGAAGGTGATAGT
Downstream 100 bases:
>100_bases GATAAAATCCATGAAATGTGGGATGGTGAGAAGGATGGACTCTATAAAGGGTGAAAAGAGACTTTTAAGATATACTTATT TTTTATGTATAGTATGCTTT
Product: FHA domain-containing protein
Products: NA
Alternate protein names: FHA Domain-Containing Protein; FHA Domain Protein; FHA-Domain Containing Secreted Protein; Protein Containing Forkhead-Associated Domain; Signal Transduction Protein; FHA-Domain-Containing Protein; Forkhead-Associated Protein; Secreted Protein
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MDLSKLSLIFKIVIIGVVYIIIFWALKIMYKDMKGGNKKRRPTGRRTFGLEIIHAINKSELRKGAVIPIRGGITIGRKPD NILILDDPYVSGHHAKIYSKNTQHIIEDLNSTNGTLLNNKNITGKNQLSPGDLIKIGGTVFKVIG
Sequences:
>Translated_145_residues MDLSKLSLIFKIVIIGVVYIIIFWALKIMYKDMKGGNKKRRPTGRRTFGLEIIHAINKSELRKGAVIPIRGGITIGRKPD NILILDDPYVSGHHAKIYSKNTQHIIEDLNSTNGTLLNNKNITGKNQLSPGDLIKIGGTVFKVIG >Mature_145_residues MDLSKLSLIFKIVIIGVVYIIIFWALKIMYKDMKGGNKKRRPTGRRTFGLEIIHAINKSELRKGAVIPIRGGITIGRKPD NILILDDPYVSGHHAKIYSKNTQHIIEDLNSTNGTLLNNKNITGKNQLSPGDLIKIGGTVFKVIG
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16104; Mature: 16104
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSKLSLIFKIVIIGVVYIIIFWALKIMYKDMKGGNKKRRPTGRRTFGLEIIHAINKSE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHH LRKGAVIPIRGGITIGRKPDNILILDDPYVSGHHAKIYSKNTQHIIEDLNSTNGTLLNNK HHCCCEEEEECCEEECCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHCCCCCCEEEECC NITGKNQLSPGDLIKIGGTVFKVIG CCCCCCCCCCCCEEEECCEEEEECC >Mature Secondary Structure MDLSKLSLIFKIVIIGVVYIIIFWALKIMYKDMKGGNKKRRPTGRRTFGLEIIHAINKSE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHH LRKGAVIPIRGGITIGRKPDNILILDDPYVSGHHAKIYSKNTQHIIEDLNSTNGTLLNNK HHCCCEEEEECCEEECCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHCCCCCCEEEECC NITGKNQLSPGDLIKIGGTVFKVIG CCCCCCCCCCCCEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA